Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_001719 and ABIE53_001720 are separated by 14 nucleotidesABIE53_001720 and ABIE53_001721 are separated by 116 nucleotidesABIE53_001721 and ABIE53_001722 are separated by 91 nucleotidesABIE53_001722 and ABIE53_001723 are separated by 90 nucleotides ABIE53_001719: ABIE53_001719 - LysR family transcriptional regulator (chromosome initiation inhibitor), at 1,939,279 to 1,940,172 _001719 ABIE53_001720: ABIE53_001720 - LysR family transcriptional regulator of abg operon, at 1,940,187 to 1,941,137 _001720 ABIE53_001721: ABIE53_001721 - hippurate hydrolase, at 1,941,254 to 1,942,426 _001721 ABIE53_001722: ABIE53_001722 - MHS family proline/betaine transporter-like MFS transporter, at 1,942,518 to 1,943,864 _001722 ABIE53_001723: ABIE53_001723 - MFS family permease, at 1,943,955 to 1,945,211 _001723
Group Condition ABIE53_001719 ABIE53_001720 ABIE53_001721 ABIE53_001722 ABIE53_001723
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -1.3 -1.3 -0.9 +0.1 -2.2
stress M9 with Chloride 200 mM +1.0 -3.5 -1.1 +0.0 -1.8
carbon source Uridine (C) -0.0 -4.3 +0.1 -0.2 -0.7
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 -3.5 +0.4 +0.3 -2.7
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -4.1 +0.4 +0.2 -0.7
plant outgrowth control Plant outgrowth control -0.2 -4.1 +0.2 +0.1 -0.4
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -0.2 -1.1 -0.1 +0.1 -3.1
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM +0.1 +1.0 -0.0 +0.2 -5.3
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -2.9 -0.4 +0.3 -0.9
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM +0.6 -0.8 -1.2 -0.1 -2.4
soil extract Adenine 5 mM in soil extract -0.9 -2.0 +0.1 +0.2 -1.4
carbon source 2-Deoxy-D-Ribose (C) -0.2 -3.6 -0.1 +0.2 -0.0
carbon source D-Lactate (C) +0.2 -3.5 -0.2 -0.1 -0.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.3 -0.0 -0.2 +0.3 -2.5
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 -1.5 +0.2 +0.0 -2.5
stress RCH2_defined_glucose_5mM with Lumazine 5 mM +0.2 -2.5 -0.5 +0.2 -0.8
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.4 -2.4 -0.2 +0.8 -2.1
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM +0.1 +0.7 -0.2 +0.1 -3.8
stress RCH2_defined_glucose_5mM with Salicylic 5 mM +0.1 +0.7 -0.8 +0.1 -2.8
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -2.4 +0.4 +0.1 -0.9
stress RCH2_defined_glucose_5mM with Abietic Acid 5 mM +0.3 -2.9 +0.3 +0.3 -0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.1 -1.5 -0.9 +0.4 -0.9
carbon source D-Glucuronic Acid (C) -0.2 -2.7 +0.7 +0.2 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.2 +1.2 -0.4 +0.2 -2.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +1.2 -0.7 +0.3 -1.9
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +0.3 +0.9 +0.4 -2.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -2.5 +1.3 +0.4 -0.2
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.2 +2.0 +0.6 +0.1 -1.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +2.0 +1.5 +0.3 -0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +2.6 +1.8 +0.3 -1.3
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ABIE53_001723
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