Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_001564 and ABIE53_001565 are separated by 173 nucleotidesABIE53_001565 and ABIE53_001566 are separated by 10 nucleotidesABIE53_001566 and ABIE53_001567 are separated by 151 nucleotidesABIE53_001567 and ABIE53_001568 are separated by 194 nucleotides ABIE53_001564: ABIE53_001564 - NAD(P)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family), at 1,744,060 to 1,744,806 _001564 ABIE53_001565: ABIE53_001565 - uncharacterized protein (TIGR00730 family), at 1,744,980 to 1,745,564 _001565 ABIE53_001566: ABIE53_001566 - AcrR family transcriptional regulator, at 1,745,575 to 1,746,288 _001566 ABIE53_001567: ABIE53_001567 - diacylglycerol kinase (ATP), at 1,746,440 to 1,747,006 _001567 ABIE53_001568: ABIE53_001568 - glycosyltransferase involved in cell wall biosynthesis, at 1,747,201 to 1,748,232 _001568
Group Condition ABIE53_001564 ABIE53_001565 ABIE53_001566 ABIE53_001567 ABIE53_001568
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.1 -3.6 -0.2 +0.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -0.2 -3.3 -0.3 +0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 +0.0 -3.4 +0.3 +0.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -0.3 -1.4 -0.3 -0.2
carbon source Tween 20 (C) +1.1 -0.1 -2.8 -0.2 -0.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.4 -1.7 -0.0 -0.1
carbon source Tween 20 (C) +1.1 -0.1 -3.0 +0.3 -0.2
in planta Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.3 -0.6 -0.1 -0.8 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -0.2 +0.2 -1.3 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 -0.5 -0.6 -0.9 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.2 -1.1 -0.3 +0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 -0.4 -1.0 -0.6 +0.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +0.0 -2.5 +1.0 -0.2
carbon source Azelaic 20 mM (C) +0.5 -0.6 -0.4 -0.5 +0.1
stress RCH2_defined_glucose_5mM with Adenine 4 mM +0.2 -1.2 +0.3 -0.0 +0.2
carbon source 4-Hydroxybenzoic Acid (C) +0.5 -0.4 -0.8 +0.2 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -0.1 +0.8 -0.3 +0.1
stress RCH2_defined_glucose_5mM with Adenine 4 mM +0.5 -0.8 +0.3 -0.1 -0.2
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.6 +0.0 +0.7 +0.2 -0.4
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.1 +0.0 +0.9 -0.7 -0.2
carbon source L-Histidine (C) +0.9 -0.6 +0.1 -0.5 +0.1
carbon source D-Sorbitol (C) +1.1 -0.2 -0.0 -0.5 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -0.4 +0.2 +1.0 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.5 +0.2 +1.1 -0.9 -0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 -0.5 +0.5 +0.4 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -0.2 +1.1 +0.3 -0.0
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.4 +1.2 +0.1 +0.2
carbon source D-Lactate (C) +0.2 +0.5 +0.1 +0.2 +0.9
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.4 +0.4 +1.1 -0.2 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.5 +1.4 +0.3 -0.1
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ABIE53_001564
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ABIE53_001565
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ABIE53_001566		 remove
ABIE53_001567
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ABIE53_001568
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