Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_001547	ABIE53_001548	ABIE53_001549	ABIE53_001550	ABIE53_001551
carbon source	D-Sorbitol (C)	-0.5	N.D.	-0.2	+0.0	-2.3
carbon source	L-Histidine (C)	-0.9	N.D.	-0.6	+0.3	-1.8
stress	M9 with Chloride 200 mM	-0.2	N.D.	+0.0	+0.1	-2.6
motility_chemotaxis	Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut	-0.2	N.D.	+0.4	-0.3	-2.3
carbon source	butyrate (C)	-0.5	N.D.	-0.4	+0.3	-1.7
carbon source	butyrate (C)	+0.1	N.D.	-0.4	+0.0	-2.0
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.2	N.D.	-0.6	-0.2	-1.7
stress	M9 with Chloride 200 mM	-0.4	N.D.	+0.3	-0.3	-1.4
motility_chemotaxis	Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut	-0.8	N.D.	+0.3	-0.0	-1.3
motility_chemotaxis	Motility_chemotaxis, R2A; outer cut	-0.3	N.D.	+0.5	-0.3	-1.1
carbon source	D-Galacturonic Acid (C)	+0.5	N.D.	-0.8	+0.2	-1.1
stress	RCH2_defined_glucose_5mM with Pyridoxal 1 mM	-0.4	N.D.	-1.0	+0.4	+0.5
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.1	N.D.	-1.4	+0.1	+0.9
stress	Growth in presence of pinene	+0.5	N.D.	-1.3	+0.5	+0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	N.D.	-0.6	+0.4	+1.0
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.7	N.D.	-0.4	+0.2	+1.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	N.D.	-0.8	+0.2	+1.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.3	N.D.	-0.9	+0.0	+1.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.2	N.D.	-1.0	+0.4	+1.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+1.1	N.D.	-0.5	+0.3	+0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	N.D.	-0.6	+0.5	+1.5
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	N.D.	+0.9	+0.6	+0.6
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.4	N.D.	-0.0	+0.5	+1.5
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.8	N.D.	+0.5	+0.0	+1.9
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.7	N.D.	-0.4	+0.2	+1.3
carbon source	Cinnamic and Ethanols	+0.7	N.D.	+0.4	-0.2	+1.0
carbon source	Shikimic Acid 5 mM (C)	+0.4	N.D.	+0.9	+0.2	+0.8
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.2	N.D.	+0.3	-0.0	+2.0
carbon source	Acetylated xylan 10 g/L (C)	+0.4	N.D.	+0.5	+0.6	+1.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.6	N.D.	+0.2	+0.2	+3.0