Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_001510	ABIE53_001511	ABIE53_001512	ABIE53_001513	ABIE53_001514
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.1	N.D.	-1.8	-0.3	-0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.0	N.D.	-1.6	-0.2	-0.3
carbon source	Acetylated xylan 10 g/L (C)	+0.2	N.D.	-0.9	-0.4	-0.8
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.1	N.D.	-1.2	-0.5	-0.2
phage	Burk1_100	-0.2	N.D.	-0.9	+0.2	-1.0
carbon source	L-Proline (C)	-0.6	N.D.	-0.9	-0.0	-0.1
carbon source	L-Tryptophan (C)	-0.4	N.D.	-1.1	+0.2	-0.2
plant outgrowth control	Plant outgrowth control	-0.2	N.D.	-0.4	-0.6	-0.2
replicable vector efficiency	Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50	+0.0	N.D.	-1.3	-0.3	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	N.D.	-1.3	+0.2	-0.2
stress	M9 with Propan-1-ol 13 g/L	-0.3	N.D.	-1.0	+0.3	-0.1
carbon source	Trisodium citrate (C)	-0.2	N.D.	-1.0	+0.3	-0.1
r2a outgrowth control	R2A outgrowth control	-0.4	N.D.	-0.3	+0.3	-0.4
carbon source	Tween 20 (C)	-0.6	N.D.	-0.4	+0.4	-0.4
stress	RCH2_defined_glucose_5mM with Sucrose 5 mM	-0.1	N.D.	-1.1	+0.1	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	N.D.	-1.1	+0.3	+0.3
stress	M9 with Chloride 200 mM	+0.2	N.D.	-1.0	-0.3	+0.3
stress	R2A with Chloride 200 mM	-0.6	N.D.	+0.7	-0.3	-0.4
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.1	N.D.	-0.9	+0.3	+0.4
stress	R2A with N-(3-oxohexanoyl)-DL-homoserine lactone 10 uM	+0.0	N.D.	+0.6	-0.6	-0.2
stress	RCH2_defined_glucose_5mM with Nerolidol 5 mM	-0.6	N.D.	+0.7	-0.1	-0.0
nitrogen source	Xanthine 5 mM (N)	+0.1	N.D.	+0.8	-0.3	-0.2
carbon source	D-Fructose (C)	-0.3	N.D.	+0.1	+0.9	-0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.4	N.D.	-0.8	+0.2	+0.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.4	N.D.	+0.3	-0.4	+0.4
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.0	N.D.	+0.7	+0.4	-0.3
carbon source	m-Inositol (C)	-0.5	N.D.	+0.5	+0.6	+0.1
in planta	Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.3	N.D.	+0.6	-0.5	+0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.4	N.D.	+0.8	-0.2	+0.2
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.6	N.D.	+0.6	+0.3	+0.1