Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_001447	ABIE53_001448	ABIE53_001449	ABIE53_001450	ABIE53_001451
plant outgrowth control	Plant outgrowth control	-0.1	-0.2	-2.8	N.D.	+0.3
carbon source	L-Fucose (C)	-0.0	+0.1	-2.0	N.D.	-0.2
stress	M9 with Chloride 200 mM	-0.2	-1.4	-0.6	N.D.	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	+0.1	-1.6	N.D.	+0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.0	-0.7	-1.1	N.D.	+0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.1	-0.1	-1.6	N.D.	+0.3
plant outgrowth control	Plant outgrowth control	+0.1	+0.3	-1.8	N.D.	+0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.2	+0.2	-1.5	N.D.	-0.1
wm3064 conjugation control	LB_DAP agar plate conjugation with WM3064, outgrowth in LB	-0.2	+0.1	-1.3	N.D.	+0.1
stress	M9 with Chloride 200 mM	+0.3	-1.5	-0.4	N.D.	+0.4
stress	R2A with p-Coumaric 0.5 mM	+0.3	-0.1	-1.3	N.D.	+0.2
carbon source	D-Mannose (C)	-0.2	+0.2	-1.1	N.D.	+0.3
nitrogen source	histamine 2mM N source	-0.2	+0.1	-1.0	N.D.	+0.4
stress	M9 with Chloride 200 mM	-0.1	-1.4	+0.8	N.D.	+0.2
stress	M9 with Chloride 200 mM	+0.5	-1.4	+0.3	N.D.	+0.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.9	-0.2	+0.8	N.D.	+0.4
stress	RCH2_defined_glucose_5mM with caffeic 0.5 mM	-0.7	-0.2	+0.7	N.D.	+0.2
soil extract	Sucrose 5 mM in soil extract	+0.3	+0.2	-0.9	N.D.	+0.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.4	+0.4	-0.3	N.D.	+0.5
stress	R2A with Chloride 200 mM	-0.1	-0.4	+0.6	N.D.	+0.6
stress	R2A with Tricalcium phosphate 0.5 g/L	-0.4	-0.0	+1.1	N.D.	+0.2
in planta	Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	-0.2	+1.4	N.D.	+0.2
carbon source	Inosine (C)	-0.4	+0.3	+1.1	N.D.	+0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.6	+0.2	+1.0	N.D.	+0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	+0.1	+1.5	N.D.	-0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.1	-0.0	+0.8	N.D.	+0.7
carbon source	L-Histidine (C)	-0.4	+0.3	+1.0	N.D.	+0.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.2	-0.1	+1.8	N.D.	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.1	+0.1	+1.9	N.D.	-0.1
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.5	+0.5	+0.1	N.D.	+0.8