Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_001437 and ABIE53_001438 are separated by 510 nucleotidesABIE53_001438 and ABIE53_001439 are separated by 132 nucleotidesABIE53_001439 and ABIE53_001440 are separated by 74 nucleotidesABIE53_001440 and ABIE53_001441 are separated by 237 nucleotides ABIE53_001437: ABIE53_001437 - acyl-CoA reductase-like NAD-dependent aldehyde dehydrogenase, at 1,606,267 to 1,607,703 _001437 ABIE53_001438: ABIE53_001438 - ATP-dependent RNA helicase RhlE, at 1,608,214 to 1,609,695 _001438 ABIE53_001439: ABIE53_001439 - glutamyl-Q tRNA(Asp) synthetase, at 1,609,828 to 1,610,727 _001439 ABIE53_001440: ABIE53_001440 - UPF0176 protein, at 1,610,802 to 1,611,830 _001440 ABIE53_001441: ABIE53_001441 - DNA-directed DNA polymerase III PolC, at 1,612,068 to 1,614,551 _001441
Group Condition ABIE53_001437 ABIE53_001438 ABIE53_001439 ABIE53_001440 ABIE53_001441
stress RCH2_defined_glucose_5mM with Adenine 5 mM -0.4 -2.4 +0.1 -0.2 N.D.
stress RCH2_defined_glucose_5mM with Adenine 5 mM -0.2 -1.8 +0.0 +0.1 N.D.
stress RCH2_defined_glucose_5mM with caffeic 1 mM -0.2 -1.1 -0.1 -0.2 N.D.
carbon source Cinnamic and Ethanols -0.3 -0.2 -0.7 -0.3 N.D.
stress RCH2_defined_glucose_5mM with caffeic 1 mM +0.1 -0.9 -0.3 -0.3 N.D.
stress RCH2_defined_glucose_5mM with Adenine 4 mM +0.1 -1.5 -0.1 +0.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -0.3 -0.2 -0.7 N.D.
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM -0.2 -0.5 -0.4 -0.3 N.D.
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -0.2 -0.6 -0.3 -0.3 N.D.
soil extract Indole-3-pyruvic 5 mM in soil extract -0.5 -0.6 -0.1 +0.0 N.D.
stress RCH2_defined_glucose_5mM with Adenine 4 mM +0.0 -1.3 +0.0 +0.1 N.D.
soil extract Indole-3-pyruvic 5 mM in soil extract +0.1 -0.9 -0.2 -0.1 N.D.
stress M9 with 3-methyl-2-butenol 2 g/L +0.0 -1.3 +0.0 +0.1 N.D.
stress RCH2_defined_glucose_5mM with Sucrose 5 mM -0.4 -0.5 +0.2 -0.5 N.D.
carbon source 2,3-dihydroxybenzoic and Ethanols -0.1 +0.2 -0.7 -0.3 N.D.
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.5 -0.6 +0.1 +0.1 N.D.
soil extract Adenine 5 mM in soil extract +0.3 -1.0 +0.0 -0.2 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.3 -0.6 -0.3 N.D.
carbon source fumaric 20mM -0.2 -0.9 +0.2 +0.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 -0.3 -0.5 -0.2 N.D.
stress M9 with 3-methyl-2-butenol 2 g/L +0.0 -1.2 +0.3 +0.3 N.D.
stress M9 with 3-methyl-2-butenol 2 g/L +0.1 -1.2 +0.3 +0.3 N.D.
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.1 -1.0 +0.6 +0.1 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 +0.5 -0.3 -0.1 N.D.
stress M9 with 3-methyl-2-butenol 2 g/L +0.3 -1.3 +0.5 +0.3 N.D.
plant outgrowth control Plant outgrowth control +0.5 +0.3 -0.4 -0.5 N.D.
m9 no stress control M9 no stress control -0.2 -0.4 +0.4 +0.3 N.D.
phage Burk1_100 +0.2 +0.5 -0.6 +0.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.2 +0.5 +0.6 -0.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +0.8 -0.2 -0.0 N.D.
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