Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_001434 and ABIE53_001435 are separated by 22 nucleotidesABIE53_001435 and ABIE53_001436 are separated by 291 nucleotidesABIE53_001436 and ABIE53_001437 are separated by 76 nucleotidesABIE53_001437 and ABIE53_001438 are separated by 510 nucleotides ABIE53_001434: ABIE53_001434 - hypothetical protein, at 1,603,619 to 1,603,867 _001434 ABIE53_001435: ABIE53_001435 - membrane-bound inhibitor of C-type lysozyme, at 1,603,890 to 1,604,246 _001435 ABIE53_001436: ABIE53_001436 - acetolactate synthase-1/2/3 large subunit, at 1,604,538 to 1,606,190 _001436 ABIE53_001437: ABIE53_001437 - acyl-CoA reductase-like NAD-dependent aldehyde dehydrogenase, at 1,606,267 to 1,607,703 _001437 ABIE53_001438: ABIE53_001438 - ATP-dependent RNA helicase RhlE, at 1,608,214 to 1,609,695 _001438
Group Condition ABIE53_001434 ABIE53_001435 ABIE53_001436 ABIE53_001437 ABIE53_001438
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -1.8 -0.3 +0.2 +0.1 -0.7
stress RCH2_defined_glucose_5mM with Adenine 5 mM +0.2 +0.4 -0.2 -0.4 -2.4
carbon source L-Proline (C) -1.8 +0.1 -0.1 -0.1 -0.2
stress RCH2_defined_glucose_5mM with Adenine 5 mM -0.2 +0.4 -0.2 -0.2 -1.8
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -1.2 -0.1 +0.5 -0.1 -1.0
soil extract Indole-3-pyruvic 5 mM in soil extract -0.8 +0.3 -0.1 -0.5 -0.6
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.8 +0.1 -0.1 +0.1 +0.0
carbon source D-Glucuronic Acid (C) -1.5 +0.0 -0.2 +0.4 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.3 +0.1 +0.3 -0.4 -0.3
stress RCH2_defined_glucose_5mM with Sucrose 5 mM -0.8 +0.3 -0.1 -0.4 -0.5
stress M9 with 3-methyl-2-butenol 2 g/L -0.4 +0.0 +0.1 +0.1 -1.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.6 -0.0 +0.0 -0.2 +0.5
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.4 +0.3 +0.1 -0.3 -0.0
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -0.5 +0.1 -0.3 +0.3
stress M9 with 3-methyl-2-butenol 2 g/L +0.4 +0.0 -0.2 +0.0 -1.3
stress RCH2_defined_glucose_5mM with Adenine 4 mM +0.1 +0.4 -0.3 +0.0 -1.3
stress RCH2_defined_glucose_5mM with Adenine 4 mM +0.3 +0.2 +0.0 +0.1 -1.5
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.3 -0.2 +0.2 -0.5 -0.6
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.5 +0.6 +0.3 +0.0 -0.2
phage Burk1_100 -1.2 -0.0 +0.1 +0.2 +0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 +0.5 +0.3 -0.1 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.4 +0.2 +0.6 +0.1 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.1 +0.4 +0.2 +0.1 +0.3
stress M9 with 3-methyl-2-butenol 2 g/L +0.6 +0.1 +0.0 +0.3 -1.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.1 +0.4 +0.4 -0.1 +0.6
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -1.0 +0.3 +0.2 +0.3 +0.3
carbon source Tween 20 (C) +1.0 +0.3 -0.2 -0.1 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +0.3 +0.3 -0.1 -0.4
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.1 +0.2 +0.2 -0.4 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 +0.3 +0.5 +0.4 +0.8
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