Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_001414	ABIE53_001415	ABIE53_001416	ABIE53_001417	ABIE53_001418
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	-0.1	-4.4	+0.1	+0.1
carbon source	Acetylated xylan 10 g/L (C)	-0.1	-0.1	-2.3	-0.9	-0.5
carbon source	D-Ribose (C)	-0.1	+0.5	-4.0	-0.0	-0.0
stress	M9 with Isopropyl alcohol 21 g/L	-0.1	-0.2	-3.4	+0.1	-0.1
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	+0.4	-3.4	-0.2	-0.2
carbon source	Shikimic Acid 5 mM (C)	-0.2	+0.3	-2.7	-0.8	-0.2
carbon source	Adenosine (C)	-0.1	+0.5	-3.8	-0.2	+0.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	-1.5	-2.0	+0.3	-0.1
stress	RCH2_defined_glucose_5mM with Cinnamic 5 mM	+0.2	-0.1	-3.6	+0.1	+0.1
carbon source	D-Xylose (C)	+0.2	+0.0	-3.6	-0.1	+0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.1	+0.1	-3.5	+0.1	+0.1
stress	M9 with Isopropyl alcohol 21 g/L	-0.0	+0.2	-3.2	-0.1	-0.1
stress	RCH2_defined_glucose_5mM with Cinnamic 5 mM	+0.1	-0.0	-3.3	+0.1	-0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.1	-0.2	-3.4	+0.8	-0.1
stress	M9 with 3-methyl-3-butenol 4.5 g/L	+0.1	-0.3	-2.9	+0.2	-0.1
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	+0.3	-2.8	-0.1	-0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.0	+0.4	-3.9	+0.2	+0.3
carbon source	Adenosine (C)	-0.1	+0.5	-3.2	-0.0	-0.2
carbon source	Xylitol (C)	+0.1	+0.6	-3.6	+0.0	-0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.0	+0.6	-3.4	-0.3	+0.2
carbon source	Inosine (C)	+0.0	+0.4	-3.0	-0.3	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.0	-0.7	-2.5	+0.6	-0.1
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	+0.6	-2.9	-0.3	-0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.1	+0.5	-2.7	-0.4	-0.1
stress	M9 with Propan-1-ol 13 g/L	+0.1	+0.2	-3.1	+0.2	+0.2
carbon source	D-Xylose (C)	+0.1	+0.4	-3.2	+0.3	+0.2
carbon source	Xylitol (C)	+0.1	+0.8	-2.8	-0.1	+0.1
stress	RCH2_defined_glucose_5mM with Salicylic 5 mM	+0.1	+0.4	-2.6	+0.5	+0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.2	-0.3	-2.1	+0.9	+0.5
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.0	+1.2	-1.5	+0.6	+0.3