Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_001344 and ABIE53_001345 are separated by 148 nucleotidesABIE53_001345 and ABIE53_001346 are separated by 115 nucleotidesABIE53_001346 and ABIE53_001347 are separated by 208 nucleotidesABIE53_001347 and ABIE53_001348 are separated by 641 nucleotides ABIE53_001344: ABIE53_001344 - putative N-acyltransferase, at 1,502,587 to 1,503,756 _001344 ABIE53_001345: ABIE53_001345 - NAD+ synthase (glutamine-hydrolyzing), at 1,503,905 to 1,505,662 _001345 ABIE53_001346: ABIE53_001346 - nitrogen regulatory protein P-II 1, at 1,505,778 to 1,506,116 _001346 ABIE53_001347: ABIE53_001347 - putative porin, at 1,506,325 to 1,507,449 _001347 ABIE53_001348: ABIE53_001348 - histidine transport system ATP-binding protein, at 1,508,091 to 1,508,870 _001348
Group Condition ABIE53_001344 ABIE53_001345 ABIE53_001346 ABIE53_001347 ABIE53_001348
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -2.7 +0.0 -0.3 -0.8 -1.2
carbon source D-Raffinose (C) +0.2 -0.1 -0.7 -3.6 -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.6 -0.3 -0.1 -1.5 -0.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.4 +0.3 -1.3 -1.9 -0.0
carbon source D-Trehalose (C) -0.1 +0.1 -0.2 -3.6 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.9 +0.0 -0.3 -1.9 +0.1
carbon source D-Raffinose (C) +0.3 -0.0 -0.3 -3.3 -0.3
carbon source D-Trehalose (C) +0.1 -0.3 -0.2 -3.3 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -2.2 +0.5 +0.1 -1.5 -0.3
carbon source D-Cellobiose (C) -0.0 +0.1 -0.7 -2.5 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.3 -0.3 +0.1 -1.2 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.3 +0.2 -1.4 -0.7 -1.1
carbon source Beta-Lactose (C) +0.2 -0.1 -0.2 -3.4 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.2 -0.1 -0.1 -2.0 +0.2
carbon source D-Cellobiose (C) -0.2 -0.0 -0.7 -2.4 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.1 -0.0 -0.2 -2.4 -0.6
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.9 +0.4 -0.6 +0.6 -1.4
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.1 -0.6 +0.4 -1.7 +0.1
carbon source D-Arabinose (C) +0.1 +0.1 -0.7 -1.8 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.1 +0.0 -0.3 -2.2 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.4 -0.0 -0.4 -2.5 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 +0.0 +0.1 -2.2 +0.4
soil extract Indole-3-pyruvic 5 mM in soil extract -0.2 +0.5 -0.9 -1.1 -0.4
carbon source Pectin 10 g/L (C) +0.0 -0.0 -0.4 -2.5 +0.6
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.1 +0.4 -0.2 +0.0 -1.3
carbon source Pectin 10 g/L (C) +0.2 -0.1 -0.4 -2.5 +0.7
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.1 +0.4 -0.1 -2.3 +0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.9 +0.2 -0.4 +0.5 -0.0
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.4 +0.1 +0.4 -1.7 +0.4
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.2 +0.4 +0.3 -2.1 +0.4
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ABIE53_001344
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ABIE53_001345
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ABIE53_001348
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