Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_001309	ABIE53_001310	ABIE53_001311	ABIE53_001312	ABIE53_001313
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.9	+0.0	N.D.	-1.6	-2.8
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	-0.0	-0.0	N.D.	-2.7	-1.5
carbon source	D,L-Malic Acid (C)	-0.2	-1.1	N.D.	-1.8	-0.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.0	+0.5	N.D.	-3.0	-1.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.0	-0.2	N.D.	-2.7	-0.3
in planta	Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.2	-0.2	N.D.	-2.6	-0.5
carbon source	Citric Acid 20 mM (C)	+0.1	-0.3	N.D.	-2.4	-0.4
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	+0.4	-0.2	N.D.	-2.8	-0.3
carbon source	Beta-Lactose (C)	-0.1	+0.1	N.D.	+0.0	-2.9
soil extract	Chlorogenic 5 mM in soil extract	-0.1	+0.1	N.D.	-2.9	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.0	+0.4	N.D.	-1.4	-1.5
carbon source	Tween 20 (C)	+0.3	+0.2	N.D.	-2.5	-0.2
carbon source	fumaric 20mM	+0.2	-0.2	N.D.	-2.5	+0.4
stress	RCH2_defined_glucose_5mM with 4-Hydroxybenzoic Acid 5 mM	-0.2	+0.1	N.D.	-2.3	+0.3
stress	RCH2_defined_glucose_5mM with D,L-Malic Acid 5 mM	-0.0	+0.4	N.D.	-2.0	-0.5
carbon source	Citric Acid 20 mM (C)	+0.2	+0.1	N.D.	-2.5	+0.1
carbon source	fumaric 20mM	-0.1	+0.1	N.D.	-2.5	+0.7
soil extract	4-Hydroxybenzoic Acid 5 mM in soil extract	-0.3	+0.2	N.D.	-2.3	+0.5
soil extract	caffeic 5 mM in soil extract	-0.4	-0.1	N.D.	-2.0	+0.6
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.0	+0.0	N.D.	-2.4	+0.7
stress	RCH2_defined_glucose_5mM with 4-Hydroxybenzoic Acid 5 mM	+0.3	+0.0	N.D.	-2.9	+0.8
carbon source	Tween 20 (C)	+0.0	+0.4	N.D.	-2.3	+0.1
stress	RCH2_defined_glucose_5mM with caffeic 0.5 mM	+0.3	+0.1	N.D.	-2.2	+0.3
carbon source	4-Hydroxybenzoic Acid (C)	-0.0	-0.0	N.D.	-2.0	+0.7
soil extract	L-Proline 5 mM in soil extract	+0.1	+0.3	N.D.	-1.9	+0.5
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.5	+0.5	N.D.	+0.2	-1.7
soil extract	D-Glucose 5 mM in soil extract	-0.1	-0.1	N.D.	-1.6	+1.3
carbon source	Acetylated xylan 10 g/L (C)	+0.3	-0.4	N.D.	-2.0	+1.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.4	+0.7	N.D.	-1.1	+0.7
carbon source	succinate (C)	+0.3	+0.3	N.D.	-1.7	+1.0