Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_001307	ABIE53_001308	ABIE53_001309	ABIE53_001310	ABIE53_001311
carbon source	D-Glucosamine Hydrochloride (C)	+0.0	-2.4	-0.2	+0.0	N.D.
in planta	Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	-2.6	-0.1	+0.4	N.D.
carbon source	D,L-Malic Acid (C)	-0.2	-2.3	+0.1	+0.2	N.D.
stress	R2A with Tricalcium phosphate 0.5 g/L	-0.4	-1.4	+0.0	-0.3	N.D.
carbon source	D-Galacturonic Acid (C)	-0.4	-1.3	+0.2	-0.1	N.D.
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	-0.8	+0.2	-0.7	N.D.
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.1	-1.6	+0.4	-0.3	N.D.
carbon source	casaminos (C)	+0.1	-1.7	+0.1	+0.0	N.D.
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.4	-1.0	+0.3	-0.3	N.D.
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	-0.1	-1.4	+0.4	-0.2	N.D.
carbon source	L-Tryptophan (C)	-0.1	-1.6	+0.2	+0.2	N.D.
plant outgrowth control	Plant outgrowth control	-0.1	-1.4	+0.1	+0.3	N.D.
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	-1.0	+0.1	+0.5	N.D.
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.3	-1.5	+0.0	+0.4	N.D.
carbon source	m-Inositol (C)	+0.1	-1.3	+0.3	+0.2	N.D.
carbon source	L-Proline (C)	-0.3	-1.2	+0.3	+0.5	N.D.
carbon source	D,L-Malic Acid (C)	+0.1	+0.7	-0.2	-1.1	N.D.
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	+1.5	-0.7	-0.4	N.D.
stress	RCH2_defined_glucose_5mM with 2,3-dihydroxybenzoic 5 mM	-0.3	+1.1	-0.2	-0.3	N.D.
nitrogen source	histamine 2mM N source	-0.0	+1.4	-0.4	-0.2	N.D.
nitrogen source	histamine 5mM N source	-0.3	+1.3	+0.2	-0.2	N.D.
biofilm	biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound	+0.1	+1.4	-0.3	-0.2	N.D.
stress	RCH2_defined_glucose_5mM with Sucrose 5 mM	-0.2	+1.4	-0.4	+0.2	N.D.
biofilm	biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound	-0.1	+1.4	-0.4	+0.3	N.D.
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	+1.0	-0.4	+0.7	N.D.
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.5	+1.2	+0.3	+0.4	N.D.
stress	R2A with Chloride 200 mM	+0.3	+1.2	-0.2	+0.2	N.D.
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.3	+1.2	-0.1	+0.4	N.D.
stress	M9 with 3-methyl-2-butenol 2 g/L	+0.4	+1.6	-0.1	-0.1	N.D.
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.5	+0.9	+0.8	-0.1	N.D.