Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_001265	ABIE53_001266	ABIE53_001267	ABIE53_001268	ABIE53_001269
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.6	N.D.	+0.5	-2.4
in planta	Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.7	N.D.	-0.7	-0.2
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	N.D.	+0.1	N.D.	-0.5	-1.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.9	N.D.	-1.6	+1.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.2	N.D.	-1.6	+0.8
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	N.D.	-0.6	N.D.	-0.6	+0.5
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	+0.2	N.D.	+0.7	-1.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.3	N.D.	-1.0	+0.8
carbon source	Acetylated xylan 10 g/L (C)	N.D.	-0.3	N.D.	-0.7	+0.9
stress	R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM	N.D.	+0.3	N.D.	-1.1	+0.8
in planta	Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.1	N.D.	-0.7	+1.0
carbon source	D-Lactate (C)	N.D.	-0.5	N.D.	-0.3	+1.0
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	+0.3	N.D.	+0.7	-0.7
carbon source	Cinnamic and Ethanols	N.D.	-0.3	N.D.	-0.3	+1.1
stress	RCH2_defined_glucose_5mM with Adenine 2 mM	N.D.	+0.5	N.D.	-0.6	+0.5
carbon source	Acetylated xylan 10 g/L (C)	N.D.	+0.2	N.D.	-0.6	+1.0
soil extract	Indole-3-pyruvic 5 mM in soil extract	N.D.	-0.5	N.D.	+1.0	+0.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	+0.6	N.D.	-0.3	+1.2
carbon source	D-Sorbitol (C)	N.D.	+0.4	N.D.	-0.2	+1.3
carbon source	D-Galacturonic Acid (C)	N.D.	+1.0	N.D.	+0.2	+0.5
carbon source	L-Rhamnose (C)	N.D.	+0.5	N.D.	+0.2	+1.0
carbon source	D-Glucuronic Acid (C)	N.D.	+0.6	N.D.	+0.4	+0.8
carbon source	D-Glucose (C)	N.D.	+0.6	N.D.	+0.6	+0.6
carbon source	m-Inositol (C)	N.D.	+0.6	N.D.	+0.4	+1.0
carbon source	D-Glucose-6-Phosphate (C)	N.D.	+0.8	N.D.	+0.1	+1.2
carbon source	Tween 20 (C)	N.D.	+0.6	N.D.	+0.5	+1.1
carbon source	D-Glucuronic Acid (C)	N.D.	+0.7	N.D.	+0.6	+0.9
carbon source	D-Mannose (C)	N.D.	+0.6	N.D.	+0.7	+0.9
carbon source	D-Fructose (C)	N.D.	+0.7	N.D.	+0.4	+1.2
carbon source	L-Histidine (C)	N.D.	+0.9	N.D.	+0.5	+0.9