Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_001131	ABIE53_001132	ABIE53_001133	ABIE53_001134	ABIE53_001135
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	-0.1	+0.3	+0.0	-4.1
motility_chemotaxis	Motility_chemotaxis, R2A; outer cut	-0.3	+0.1	-0.5	-0.3	-3.0
stress	RCH2_defined_glucose_5mM with D,L-Malic Acid 5 mM	-0.1	-0.0	+0.1	-0.1	-3.9
soil extract	D-Glucose 5 mM in soil extract	-0.2	-0.0	+0.0	-0.1	-3.6
stress	R2A with Tricalcium phosphate 0.5 g/L	+0.2	-0.2	+0.2	+0.1	-4.2
carbon source	L-Phenylalanine (C)	+0.0	-0.0	-0.1	-0.0	-3.7
motility_chemotaxis	Motility_chemotaxis, R2A; outer cut	-0.5	-0.0	-0.0	-0.2	-3.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.2	-0.0	-0.1	+0.1	-3.6
carbon source	Glucuronamide (C)	+0.1	-0.1	-0.2	-0.1	-3.4
stress	RCH2_defined_glucose_5mM with Adenine 2 mM	-0.0	-0.1	-0.1	-0.4	-3.1
stress	RCH2_defined_glucose_5mM with 2-Deoxy-D-glucose 5 mM	+0.2	-0.0	+0.1	-0.0	-3.9
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	+0.1	-0.2	-0.2	-2.8
stress	RCH2_defined_glucose_5mM with Guanine 5 mM	+0.1	+0.0	+0.1	-0.1	-3.6
stress	RCH2_defined_glucose_5mM with Chlorogenic 0.5 mM	+0.2	-0.1	+0.2	-0.2	-3.5
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 0.5 mM	+0.3	-0.0	+0.0	+0.0	-3.8
pH	R2A pH 5.8	+0.1	+0.1	-0.2	-0.0	-3.4
stress	RCH2_defined_glucose_5mM with Pyridoxal 0.5 mM	+0.2	+0.1	+0.1	+0.1	-3.9
stress	RCH2_defined_glucose_5mM with Serotonin 5 mM	+0.4	-0.1	+0.0	-0.1	-3.5
stress	RCH2_defined_glucose_5mM with Lumazine 5 mM	+0.4	+0.1	+0.0	-0.2	-3.5
stress	RCH2_defined_glucose_5mM with homovanillyl alcohol 5 mM	+0.0	+0.0	+0.2	-0.4	-3.1
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.1	+0.3	-0.8	+0.0	-2.9
stress	RCH2_defined_glucose_5mM with Sucrose 5 mM	+0.1	-0.2	+0.2	-0.2	-3.1
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	+0.1	+0.1	+0.1	-3.5
stress	RCH2_defined_glucose_5mM with Pyridoxal 1 mM	+0.1	+0.0	+0.3	+0.1	-3.4
pH	R2A pH 8.3	+0.2	+0.1	-0.1	+0.0	-3.2
stress control	RCH2_defined_glucose_5mM with Dimethyl Sulfoxide 1 vol%	+0.1	-0.1	+0.4	-0.0	-3.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.4	+0.1	-0.3	+0.1	-3.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.3	+0.1	-0.0	+0.2	-3.0
phage	Burk1_100	+0.4	-0.1	+0.2	-0.1	-2.9
stress	RCH2_defined_glucose_5mM with Pyridoxal 1 mM	+0.3	+0.2	+0.4	+0.2	-3.3