Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_000984	ABIE53_000985	ABIE53_000986	ABIE53_000987	ABIE53_000988
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.1	-0.5	+0.3	+0.0	-3.3
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.2	-0.3	-1.4	+0.4	-1.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.1	-0.7	-0.6	+0.2	-1.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.2	-0.2	-0.7	+0.6	-1.6
stress	RCH2_defined_glucose_5mM with Serotonin 5 mM	-0.4	+0.3	-0.4	+0.0	-1.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.4	-0.4	+0.3	+0.2	-1.6
r2a outgrowth control	R2A outgrowth control	+0.5	-0.2	-0.3	+0.4	-1.0
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.9	+0.3	-1.2	+0.6	-0.0
carbon source	L-Proline (C)	-0.3	+0.1	-0.3	-0.3	+1.3
carbon source	D-Galacturonic Acid (C)	-0.2	-0.0	-0.2	-0.4	+1.4
carbon source	D,L-Malic Acid (C)	+0.0	-0.7	+0.1	+0.2	+1.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.4	-0.3	-0.6	+0.3	+1.1
carbon source	D-Glucose (C)	-0.4	-0.1	+0.2	-0.2	+1.7
carbon source	Tween 20 (C)	-0.4	-0.3	+0.5	-0.5	+1.8
carbon source	D-Gluconic Acid (C)	-0.4	-0.2	+0.4	-0.1	+1.5
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.5	-0.2	-0.2	-0.1	+1.3
carbon source	D-Gluconic Acid (C)	-0.2	-0.2	+0.2	-0.1	+1.6
carbon source	Tween 20 (C)	-0.2	-0.4	+0.4	-0.2	+1.8
carbon source	D-Galacturonic Acid (C)	-0.1	-0.1	+0.4	-0.3	+1.7
carbon source	D-Glucose (C)	-0.5	+0.1	+0.4	-0.1	+1.7
carbon source	D-Glucuronic Acid (C)	-0.4	-0.2	+0.3	-0.0	+1.9
carbon source	L-Rhamnose (C)	-0.2	+0.3	+0.2	-0.1	+1.5
carbon source	D-Galactose (C)	+0.0	+0.0	+0.3	-0.4	+1.8
carbon source	D-Mannose (C)	+0.1	-0.1	+0.2	-0.2	+1.8
carbon source	L-Histidine (C)	-0.3	-0.5	+0.4	+0.1	+2.1
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.6	+0.2	+0.1	+0.2	+2.0
carbon source	D-Fructose (C)	-0.5	+0.0	+0.7	-0.1	+2.0
carbon source	D-Glucose-6-Phosphate (C)	-0.6	+0.2	+0.3	-0.1	+2.3
carbon source	D-Sorbitol (C)	+0.0	+0.3	+0.3	-0.2	+1.8
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	+0.6	+0.6	+0.3	+1.0