Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_000936 and ABIE53_000937 are separated by 161 nucleotidesABIE53_000937 and ABIE53_000938 are separated by 78 nucleotidesABIE53_000938 and ABIE53_000939 overlap by 29 nucleotidesABIE53_000939 and ABIE53_000940 are separated by 56 nucleotides ABIE53_000936: ABIE53_000936 - Undecaprenyl-phosphate glucose phosphotransferase, at 1,020,019 to 1,021,404 _000936 ABIE53_000937: ABIE53_000937 - polysaccharide export outer membrane protein, at 1,021,566 to 1,022,615 _000937 ABIE53_000938: ABIE53_000938 - uncharacterized protein involved in exopolysaccharide biosynthesis, at 1,022,694 to 1,024,028 _000938 ABIE53_000939: ABIE53_000939 - capsular exopolysaccharide synthesis family protein, at 1,024,000 to 1,024,929 _000939 ABIE53_000940: ABIE53_000940 - GDPmannose 4,6-dehydratase, at 1,024,986 to 1,026,104 _000940
Group Condition ABIE53_000936 ABIE53_000937 ABIE53_000938 ABIE53_000939 ABIE53_000940
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.1 -1.6 -0.3 -2.8 +0.3
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -2.7 +0.1 -0.2 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -1.1 -0.2 -0.9 -0.7
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.2 -1.7 -0.0 -0.3 +0.2
plant outgrowth control Plant outgrowth control -0.1 -0.9 +0.3 -2.1 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -1.1 -0.5 -0.8 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -1.4 -0.4 +0.2 +0.5
in planta Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.6 -0.6 +0.3 -1.6 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -1.5 +0.4 +0.7 +0.7
carbon source D-Fructose (C) +0.4 +0.4 +0.6 -0.9 -0.9
soil extract caffeic 5 mM in soil extract +0.3 -0.5 +0.2 -1.1 +0.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +0.9 +0.9 -1.1 -0.1
stress RCH2_defined_glucose_5mM with Sucrose 5 mM +0.7 -0.6 +0.7 -0.4 +0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.5 +0.8 +0.5 -0.7 +0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.0 +0.9 -0.2 -0.3 +0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +0.3 +0.2 -0.5 +1.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +1.3 +0.5 -0.6 +0.6
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.4 +0.5 +0.5 +0.5 +1.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -0.9 +1.9 +1.7 +0.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 -1.4 +1.8 +1.8 +1.1
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.6 +0.7 +0.9 +0.2 +1.5
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.6 +2.3 +0.2 -0.0 -0.2
carbon source D-Glucuronic Acid (C) +0.6 +0.0 +1.0 +1.2 +1.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.3 +2.6 +0.8 -1.1 +1.1
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.2 -0.2 +1.6 +2.5 +1.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.0 +1.3 +1.1 +0.3 +1.1
carbon source Tween 20 (C) +1.2 +2.0 +0.7 +0.5 +1.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.0 +1.1 +1.4 +1.3 +0.9
carbon source Tween 20 (C) +1.4 +2.2 +0.7 +1.1 +0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.3 +1.4 +1.6 +1.5 +1.1
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ABIE53_000936
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ABIE53_000937
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ABIE53_000939
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ABIE53_000940
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