Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_000827 and ABIE53_000828 are separated by 99 nucleotidesABIE53_000828 and ABIE53_000829 are separated by 18 nucleotidesABIE53_000829 and ABIE53_000830 are separated by 116 nucleotidesABIE53_000830 and ABIE53_000831 are separated by 181 nucleotides ABIE53_000827: ABIE53_000827 - MHS family proline/betaine transporter-like MFS transporter, at 895,650 to 896,927 _000827 ABIE53_000828: ABIE53_000828 - preprotein translocase subunit SecF, at 897,027 to 897,977 _000828 ABIE53_000829: ABIE53_000829 - preprotein translocase subunit SecD, at 897,996 to 900,071 _000829 ABIE53_000830: ABIE53_000830 - preprotein translocase subunit YajC, at 900,188 to 900,520 _000830 ABIE53_000831: ABIE53_000831 - queuine tRNA-ribosyltransferase, at 900,702 to 901,895 _000831
Group Condition ABIE53_000827 ABIE53_000828 ABIE53_000829 ABIE53_000830 ABIE53_000831
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 N.D. N.D. -6.6 -3.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 N.D. N.D. -6.2 -3.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 N.D. N.D. -6.1 -3.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 N.D. N.D. -6.3 -2.5
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 N.D. N.D. -6.0 -2.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 N.D. N.D. -6.4 -1.6
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 N.D. N.D. -6.4 -1.4
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 N.D. N.D. -6.1 -1.7
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 N.D. N.D. -6.2 -2.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 N.D. N.D. -5.8 -2.0
carbon source 4-Hydroxybenzoic Acid (C) -0.3 N.D. N.D. -6.1 -1.0
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 N.D. N.D. -4.8 -2.6
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 N.D. N.D. -5.9 -1.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 N.D. N.D. -4.8 -1.9
carbon source Shikimic Acid 5 mM (C) +0.1 N.D. N.D. -5.4 -1.9
stress R2A with Tricalcium phosphate 0.5 g/L -0.1 N.D. N.D. -5.6 -1.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 N.D. N.D. -4.8 -2.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 N.D. N.D. -4.7 -2.1
stress R2A with Tricalcium phosphate 0.5 g/L +0.1 N.D. N.D. -5.5 -1.3
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM +0.0 N.D. N.D. -6.5 -0.3
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM +0.1 N.D. N.D. -6.4 -0.4
phage Burk2_1 +0.1 N.D. N.D. -5.9 -0.9
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 N.D. N.D. -5.8 -0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 N.D. N.D. -5.6 -0.6
phage Burk1_10 -0.0 N.D. N.D. -5.7 -0.8
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 N.D. N.D. -4.5 -2.1
stress RCH2_defined_glucose_5mM with 4-Pyridoxic 5 mM +0.0 N.D. N.D. -6.3 +0.2
stress RCH2_defined_glucose_5mM with 2-Deoxy-D-glucose 5 mM -0.0 N.D. N.D. -6.1 +0.4
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 0.5 mM +0.1 N.D. N.D. -6.1 +0.3
carbon source L-Alanine (C) +0.2 N.D. N.D. -5.9 +0.4
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