Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_000802 and ABIE53_000803 are separated by 111 nucleotidesABIE53_000803 and ABIE53_000804 are separated by 34 nucleotidesABIE53_000804 and ABIE53_000805 are separated by 44 nucleotidesABIE53_000805 and ABIE53_000806 are separated by 40 nucleotides ABIE53_000802: ABIE53_000802 - putative porin, at 870,771 to 871,883 _000802 ABIE53_000803: ABIE53_000803 - lactoylglutathione lyase, at 871,995 to 872,381 _000803 ABIE53_000804: ABIE53_000804 - putative metal-dependent hydrolase, at 872,416 to 873,285 _000804 ABIE53_000805: ABIE53_000805 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 873,330 to 874,088 _000805 ABIE53_000806: ABIE53_000806 - D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase, at 874,129 to 874,683 _000806
Group Condition ABIE53_000802 ABIE53_000803 ABIE53_000804 ABIE53_000805 ABIE53_000806
carbon source Cinnamic and Ethanols +0.1 -0.1 -0.2 -4.3 N.D.
plant outgrowth control Plant outgrowth control -0.2 -0.4 +0.2 -3.9 N.D.
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM -0.1 -0.2 +0.1 -4.0 N.D.
r2a outgrowth control R2A outgrowth control -0.1 +0.2 +0.0 -4.3 N.D.
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM +0.0 +0.0 -0.2 -3.8 N.D.
stress Growth in presence of pinene -0.0 +0.2 +0.0 -4.2 N.D.
plant outgrowth control Plant outgrowth control -0.2 -0.1 +0.1 -3.7 N.D.
carbon source Ethanol (C) +0.1 -0.1 -0.0 -3.9 N.D.
stress RCH2_defined_glucose_5mM with homovanillyl alcohol 5 mM +0.0 -0.1 +0.1 -3.9 N.D.
plant outgrowth control Plant outgrowth control -0.2 +0.2 -0.2 -3.7 N.D.
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM +0.1 +0.1 +0.1 -4.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.0 -0.1 -3.9 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.7 +0.2 -3.3 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -0.6 +0.7 -3.5 N.D.
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 0.5 mM +0.0 +0.1 +0.2 -3.7 N.D.
stress RCH2_defined_glucose_5mM with Pyridoxal 0.5 mM -0.0 +0.2 +0.4 -3.9 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.5 +0.5 -3.6 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.6 +1.2 -4.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.0 +0.2 -3.6 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.0 +0.1 +0.4 -3.5 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.3 +0.9 -3.6 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.0 +1.4 -4.1 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +0.2 +0.8 -3.4 N.D.
motility_chemotaxis Motility_chemotaxis, R2A; outer cut +0.2 +0.2 +0.6 -3.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.2 +1.0 -3.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.1 +0.7 +0.4 -3.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +0.3 +0.4 -3.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.3 +0.8 -3.1 N.D.
in planta Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.5 +0.6 +0.2 -2.9 N.D.
stress M9 with 3-methyl-2-butenol 2 g/L -0.0 -0.1 +0.3 +3.7 N.D.
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