Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_000769 and ABIE53_000770 are separated by 84 nucleotidesABIE53_000770 and ABIE53_000771 are separated by 67 nucleotidesABIE53_000771 and ABIE53_000772 are separated by 38 nucleotidesABIE53_000772 and ABIE53_000773 are separated by 193 nucleotides ABIE53_000769: ABIE53_000769 - diadenosine tetraphosphate (Ap4A) HIT family hydrolase, at 832,227 to 832,655 _000769 ABIE53_000770: ABIE53_000770 - DUF971 family protein, at 832,740 to 833,153 _000770 ABIE53_000771: ABIE53_000771 - demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, at 833,221 to 833,952 _000771 ABIE53_000772: ABIE53_000772 - putative lipid-binding transport protein (Tim44 family), at 833,991 to 834,989 _000772 ABIE53_000773: ABIE53_000773 - ubiquinone biosynthesis protein UbiJ, at 835,183 to 835,827 _000773
Group Condition ABIE53_000769 ABIE53_000770 ABIE53_000771 ABIE53_000772 ABIE53_000773
carbon source D-Lactate (C) -1.4 -2.0 N.D. +0.0 N.D.
carbon source D-Lactate (C) -1.1 -1.9 N.D. -0.1 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -0.2 N.D. -1.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 -0.1 N.D. -1.8 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.6 -0.4 N.D. -0.7 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.1 N.D. -1.4 N.D.
stress RCH2_defined_glucose_5mM with Adenine 5 mM -0.8 -0.7 N.D. +0.1 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.6 -0.2 N.D. -0.7 N.D.
plant outgrowth control Plant outgrowth control -0.4 -0.1 N.D. -0.9 N.D.
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM -0.2 +0.0 N.D. -1.2 N.D.
plant outgrowth control Plant outgrowth control -0.2 +0.0 N.D. -1.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.0 N.D. -1.5 N.D.
carbon source Cinnamic and Ethanols +0.0 +0.2 N.D. -1.5 N.D.
carbon source Ferulic Acid and Ethanols -0.3 +0.0 N.D. -1.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.1 N.D. -1.1 N.D.
carbon source Ethanol (C) +0.1 -0.1 N.D. -1.1 N.D.
carbon source Cinnamic and Ethanols -0.0 +0.1 N.D. -1.1 N.D.
stress R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM -0.6 +0.2 N.D. -0.6 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.2 N.D. -0.9 N.D.
carbon source Ethanol (C) +0.1 +0.2 N.D. -1.1 N.D.
carbon source homovanillyl alcohol and Ethanols +0.2 +0.1 N.D. -1.0 N.D.
plant outgrowth control Plant outgrowth control +0.4 +0.0 N.D. -0.9 N.D.
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.5 -0.2 N.D. +0.6 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.6 N.D. -0.4 N.D.
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.5 -0.3 N.D. +0.5 N.D.
stress M9 with 3-methyl-2-butenol 2 g/L -0.1 -0.1 N.D. +1.3 N.D.
stress M9 with 3-methyl-2-butenol 2 g/L -0.1 -0.3 N.D. +1.5 N.D.
stress M9 with 3-methyl-2-butenol 2 g/L +0.2 -0.1 N.D. +1.2 N.D.
m9 no stress control M9 no stress control +0.3 -0.0 N.D. +1.0 N.D.
stress M9 with 3-methyl-2-butenol 2 g/L +0.2 +0.0 N.D. +1.3 N.D.
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