Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_000697	ABIE53_000698	ABIE53_000699	ABIE53_000700	ABIE53_000701
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	-0.6	+0.1	-0.1	N.D.	-1.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	-0.2	-0.1	N.D.	-1.6
stress	RCH2_defined_glucose_5mM with Cinnamic 5 mM	-0.3	+0.2	-0.2	N.D.	-1.7
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM	-0.7	+0.1	+0.1	N.D.	-1.4
carbon source	L-Proline (C)	-0.3	-0.0	-0.0	N.D.	-1.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.3	+0.0	+0.1	N.D.	-1.7
r2a outgrowth control	R2A outgrowth control	+0.1	+0.0	+0.1	N.D.	-2.1
carbon source	4-Hydroxybenzoic Acid (C)	-0.2	+0.2	+0.0	N.D.	-1.8
stress	RCH2_defined_glucose_5mM with Pyridoxal 1 mM	-0.3	+0.1	+0.1	N.D.	-1.6
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	-0.6	+0.1	-0.0	N.D.	-1.3
stress	R2A with 3-methyl-3-butenol 4.5 g/L	-0.2	-0.0	+0.1	N.D.	-1.6
stress	RCH2_defined_glucose_5mM with 2,3-dihydroxybenzoic 5 mM	-0.6	+0.3	-0.0	N.D.	-1.3
stress	RCH2_defined_glucose_5mM with 2,3-dihydroxybenzoic 5 mM	-0.1	+0.2	-0.0	N.D.	-1.7
stress	R2A with Propan-1-ol 13 g/L	-0.1	+0.1	+0.1	N.D.	-1.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.2	+0.2	+0.4	N.D.	-2.3
stress	RCH2_defined_glucose_5mM with Pyridoxal 1 mM	-0.0	+0.2	+0.0	N.D.	-1.7
carbon source	Acetylated xylan 10 g/L (C)	-1.7	+0.1	+0.2	N.D.	-0.1
phage	Burk1_100	+0.1	+0.1	+0.1	N.D.	-1.8
stress	RCH2_defined_glucose_5mM with Ferulic Acid 5 mM	-0.4	+0.1	+0.1	N.D.	-1.2
stress	RCH2_defined_glucose_5mM with Chlorogenic 2 mM	-0.2	+0.3	-0.1	N.D.	-1.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.3	-0.1	+0.2	N.D.	-1.6
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	+0.3	+0.3	N.D.	-1.4
stress	RCH2_defined_glucose_5mM with Adenine 4 mM	-1.9	+0.1	-0.1	N.D.	+0.8
stress	RCH2_defined_glucose_5mM with Adenine 5 mM	-2.0	+0.1	+0.0	N.D.	+0.9
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	+0.3	+0.2	N.D.	-1.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.3	+0.4	+0.0	N.D.	-1.7
stress	RCH2_defined_glucose_5mM with Adenine 4 mM	-1.7	-0.2	-0.1	N.D.	+1.1
carbon source	Acetylated xylan 10 g/L (C)	-1.5	+0.1	+0.1	N.D.	+0.6
stress	RCH2_defined_glucose_5mM with Adenine 5 mM	-2.1	+0.0	+0.1	N.D.	+1.3
motility_chemotaxis	Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut	+0.3	+0.2	+0.2	N.D.	-1.2