Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_000692	ABIE53_000693	ABIE53_000694	ABIE53_000695	ABIE53_000696
stress	R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM	-0.1	+0.1	N.D.	-2.3	-0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	-0.0	N.D.	-1.9	-0.3
soil extract	Indole-3-pyruvic 5 mM in soil extract	-0.0	+0.2	N.D.	-1.6	-0.5
stress	RCH2_defined_glucose_5mM with Cinnamic 5 mM	-0.3	+0.3	N.D.	-1.6	-0.3
stress	RCH2_defined_glucose_5mM with Cinnamic 5 mM	-0.5	+0.1	N.D.	-1.1	-0.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	-0.3	N.D.	-0.7	-0.4
carbon source	Adenosine (C)	+0.0	-0.1	N.D.	-1.2	-0.2
stress	R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM	-0.2	+0.1	N.D.	-1.2	+0.0
soil extract	Indole-3-pyruvic 5 mM in soil extract	-0.0	+0.2	N.D.	-1.3	-0.1
plant outgrowth control	Plant outgrowth control	+0.2	-0.0	N.D.	-1.0	-0.2
carbon source	L-Proline (C)	-0.2	+0.3	N.D.	-0.7	-0.2
stress	RCH2_defined_glucose_5mM with 4-Pyridoxic 5 mM	-0.5	-0.2	N.D.	+0.3	-0.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	+0.0	N.D.	-0.8	+0.3
stress	RCH2_defined_glucose_5mM with homovanillyl alcohol 5 mM	-0.5	+0.0	N.D.	+0.4	-0.6
in planta	Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.3	+0.1	N.D.	-0.7	-0.2
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 0.5 mM	-0.5	-0.1	N.D.	+0.8	-0.4
stress	RCH2_defined_glucose_5mM with Serotonin 5 mM	-0.4	+0.0	N.D.	+0.8	-0.7
stress	RCH2_defined_glucose_5mM with homovanillyl alcohol 5 mM	-0.2	-0.1	N.D.	+0.7	-0.6
stress	RCH2_defined_glucose_5mM with Serotonin 5 mM	-0.3	+0.1	N.D.	+0.6	-0.6
stress	RCH2_defined_glucose_5mM with Epiandrosterone 5 mM	-0.4	-0.0	N.D.	+0.6	-0.2
stress	RCH2_defined_glucose_5mM with Adenine 5 mM	-0.4	+0.2	N.D.	+0.5	-0.3
stress	RCH2_defined_glucose_5mM with 2-Deoxy-D-glucose 5 mM	-0.2	+0.2	N.D.	+0.6	-0.3
stress	RCH2_defined_glucose_5mM with Lumazine 5 mM	-0.3	+0.0	N.D.	+1.3	-0.5
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.1	-0.0	N.D.	-0.2	+1.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	-0.1	N.D.	+1.0	+0.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	+0.1	N.D.	-0.3	+1.1
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.0	-0.0	N.D.	+0.9	+0.6
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.5	+0.2	N.D.	-0.2	+1.2
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.4	-0.3	N.D.	+1.4	+0.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.0	+0.0	N.D.	+1.0	+1.0