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Fitness for 5 genes in
Paraburkholderia graminis OAS925
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE53_000574 and ABIE53_000575 are separated by 318 nucleotides
ABIE53_000575 and ABIE53_000576 are separated by 125 nucleotides
ABIE53_000576 and ABIE53_000577 are separated by 6 nucleotides
ABIE53_000577 and ABIE53_000578 are separated by 35 nucleotides
ABIE53_000574: ABIE53_000574 - glyoxylate/hydroxypyruvate reductase A, at 624,353 to 625,294
_000574
ABIE53_000575: ABIE53_000575 - putative alpha/beta hydrolase family esterase, at 625,613 to 626,215
_000575
ABIE53_000576: ABIE53_000576 - sulfate transport system substrate-binding protein, at 626,341 to 627,372
_000576
ABIE53_000577: ABIE53_000577 - biotin synthase, at 627,379 to 628,473
_000577
ABIE53_000578: ABIE53_000578 - dethiobiotin synthetase, at 628,509 to 629,237
_000578
Group
Condition
ABIE53
_000574
ABIE53
_000575
ABIE53
_000576
ABIE53
_000577
ABIE53
_000578
stress
M9 with Propan-1-ol 13 g/L
-0.1
+0.2
-0.1
-7.3
-5.9
stress
M9 with Isopropyl alcohol 21 g/L
-0.0
+0.2
-0.0
-6.4
-5.4
stress
M9 with Propan-1-ol 13 g/L
+0.2
-0.2
+0.1
-6.9
-4.6
stress
M9 with Propan-1-ol 13 g/L
+0.1
-0.2
+0.0
-6.9
-4.0
stress
M9 with PEG 6000 16 vol%
+0.0
+0.1
-0.1
-5.1
-5.0
stress
M9 with Propan-1-ol 13 g/L
+0.2
-0.0
+0.1
-5.7
-4.6
stress
M9 with Isopropyl alcohol 21 g/L
+0.1
+0.1
+0.2
-6.7
-3.8
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days
-0.4
-1.0
+0.3
-4.2
-4.3
stress
M9 with Ethanol 2.5 vol%
+0.2
+0.1
+0.0
-5.3
-4.6
stress
M9 with 3-methyl-2-butenol 2 g/L
-0.1
-0.2
-0.1
-5.7
-3.2
stress
M9 with Ethanol 2.5 vol%
+0.1
+0.5
+0.2
-5.9
-3.3
stress
M9 with Isopropyl alcohol 21 g/L
+0.2
+0.3
-0.0
-4.6
-4.3
stress
M9 with 3-methyl-2-butenol 2 g/L
-0.3
-0.1
-0.1
-4.6
-3.3
stress
M9 with 3-methyl-2-butenol 2 g/L
-0.0
+0.2
+0.0
-4.3
-4.2
stress
R2A with Propan-1-ol 13 g/L
-0.1
-0.3
-0.1
-4.4
-3.4
stress
M9 with Isopropyl alcohol 21 g/L
+0.1
-0.2
+0.0
-4.7
-3.5
stress
R2A with Propan-1-ol 13 g/L
-0.1
-0.1
-0.1
-4.0
-4.1
stress
M9 with Ethanol 2.5 vol%
+0.2
+0.6
+0.2
-4.8
-4.4
stress
M9 with 3-methyl-2-butenol 2 g/L
-0.0
+0.0
-0.2
-4.5
-3.3
stress
M9 with Ethanol 2.5 vol%
+0.3
-0.1
+0.0
-4.7
-3.3
stress
M9 with 3-methyl-3-butenol 4.5 g/L
-0.0
-0.1
-0.0
-4.6
-3.2
stress
M9 with Chloride 200 mM
+0.5
-0.2
-0.2
-4.0
-3.8
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days
+0.3
-0.4
+0.3
-4.2
-3.9
stress
M9 with Chloride 200 mM
+0.3
-0.0
+0.2
-3.8
-4.5
stress
M9 with PEG 6000 16 vol%
-0.1
+0.3
-0.1
-4.3
-3.5
stress
M9 with PEG 6000 16 vol%
-0.2
+0.1
-0.2
-4.4
-3.0
stress
R2A with Propan-1-ol 13 g/L
-0.1
+0.2
+0.1
-4.3
-3.5
stress
M9 with PEG 6000 16 vol%
+0.1
+0.2
-0.1
-3.7
-4.1
stress
M9 with Chloride 200 mM
+0.0
+0.6
+0.1
-4.1
-3.3
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days
+0.3
-0.1
+0.4
-3.8
-3.3
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