Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_000566	ABIE53_000567	ABIE53_000568	ABIE53_000569	ABIE53_000570
carbon source	L-Rhamnose (C)	-0.1	-4.2	+0.1	-0.8	+0.0
carbon source	L-Arabinose (C)	-0.0	-4.4	+0.1	-0.2	-0.1
plant outgrowth control	Plant outgrowth control	+0.1	-3.1	-0.2	-0.2	-0.7
soil extract	caffeic 5 mM in soil extract	-0.2	-4.0	+0.2	-0.3	+0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.2	-3.0	-0.3	+0.1	-0.8
stress	RCH2_defined_glucose_5mM with Sucrose 5 mM	+0.2	-4.0	+0.2	-0.1	+0.2
carbon source	Fumarate (C)	+0.1	-3.1	-0.1	-0.3	-0.0
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.7	-2.0	+0.1	-0.3	-0.4
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.7	-1.8	+0.3	-1.6	+0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.2	-2.9	+0.1	-0.3	-0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	+0.4	-0.3	-2.1	-0.9
carbon source	D-Lactate (C)	+0.1	-3.0	+0.3	-0.4	-0.1
carbon source	D-Galactose (C)	+0.1	-3.6	+0.1	-0.2	+0.8
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.5	-3.1	-0.2	-0.2	+0.3
stress	RCH2_defined_glucose_5mM with L-Proline 5 mM	+0.0	-3.6	+0.3	-0.1	+0.8
carbon source	D-Sorbitol (C)	+0.2	-2.6	+0.1	-1.2	+1.0
stress	RCH2_defined_glucose_5mM with Sucrose 5 mM	-0.2	-3.3	+0.2	+0.2	+0.6
carbon source	D-Galactose (C)	-0.3	-3.3	+0.3	-0.2	+1.1
carbon source	Trisodium citrate (C)	-0.0	-2.8	+0.1	-0.2	+0.7
stress	RCH2_defined_glucose_5mM with Adenine 4 mM	+0.1	-2.8	+0.3	-0.5	+0.8
stress	RCH2_defined_glucose_5mM with Nerolidol 5 mM	+0.1	-2.5	+0.4	-0.4	+0.7
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.2	+1.3	+0.2	-2.8	-0.4
carbon source	D-Glucose (C)	+0.2	-2.2	+0.4	-1.1	+1.3
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.2	+0.9	+0.0	-2.2	+0.2
carbon source	D-Sorbitol (C)	+0.1	-2.0	+0.2	-0.6	+1.5
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.0	+2.1	+0.3	-2.1	-0.5
carbon source	D-Fructose (C)	+0.1	-1.7	+0.5	-0.6	+1.6
carbon source	Tween 20 (C)	+0.9	-1.6	+0.2	-0.3	+1.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.4	+3.2	+0.1	-0.3	+0.1
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.0	+2.3	-0.0	+0.9	+0.8