Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_000506	ABIE53_000507	ABIE53_000508	ABIE53_000509	ABIE53_000510
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.7	-0.9	-0.6	-0.2	-0.5
plant outgrowth control	Plant outgrowth control	-0.5	-0.5	-0.4	-0.6	-0.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.4	+0.0	-0.3	-0.5	-1.6
r2a outgrowth control	R2A outgrowth control	-0.3	-0.4	-0.1	-0.4	-1.5
carbon source	Acetylated xylan 10 g/L (C)	-0.6	-0.5	-0.2	-1.2	-0.1
plant outgrowth control	Plant outgrowth control	-0.1	-0.3	-0.2	-0.4	-1.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	-0.3	-0.5	-0.3	-1.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	-0.3	-0.0	-1.2	-0.8
plant outgrowth control	Plant outgrowth control	-0.7	-0.2	-0.4	-0.7	-0.4
plant outgrowth control	Plant outgrowth control	-0.5	-0.4	-0.3	-0.3	-0.8
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	+0.2	-0.3	-0.7	-1.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	-0.1	-0.5	-1.0	-0.3
carbon source	Shikimic Acid 5 mM (C)	-0.5	-0.3	-0.4	-0.9	-0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.6	-0.1	-0.6	-0.8	-0.2
r2a outgrowth control	R2A outgrowth control	-0.2	-0.1	-0.3	-0.6	-1.1
carbon source	Acetylated xylan 10 g/L (C)	-0.5	-0.2	-0.5	-0.7	-0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.6	-0.0	-0.6	-0.9	-0.0
carbon source	Shikimic Acid 5 mM (C)	-0.4	-0.7	-0.5	-0.9	+0.4
carbon source	4-Hydroxybenzoic Acid (C)	-0.3	-0.0	-0.3	-0.4	-1.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	-1.3	-0.3	-0.4	+0.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.8	-0.7	-0.2	-0.3	+0.2
carbon source	2-Deoxy-D-Ribose (C)	-0.0	+0.1	-0.3	+0.2	-1.8
carbon source	D-Galactose (C)	-0.0	+0.3	-0.2	-0.5	-1.1
nitrogen source	histamine 2mM N source	-0.3	+0.2	+0.1	-0.5	-1.0
carbon source	butyrate (C)	+0.2	-0.5	+0.2	+0.0	-1.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.4	+0.4	-0.2	-0.6	-1.1
carbon source	L-Histidine (C)	+0.3	+0.6	-0.3	+0.2	-0.8
carbon source	L-Proline (C)	-0.4	+0.5	-0.4	+0.3	+0.6
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.5	+0.6	-0.1	-0.3	+0.8
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.4	+0.0	+0.1	+0.5	+1.5