Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_000449 and ABIE53_000450 overlap by 2 nucleotidesABIE53_000450 and ABIE53_000451 are separated by 258 nucleotidesABIE53_000451 and ABIE53_000452 are separated by 704 nucleotidesABIE53_000452 and ABIE53_000453 are separated by 156 nucleotides ABIE53_000449: ABIE53_000449 - signal transduction histidine kinase, at 485,238 to 486,134 _000449 ABIE53_000450: ABIE53_000450 - hypothetical protein, at 486,133 to 486,294 _000450 ABIE53_000451: ABIE53_000451 - ferredoxin--NADP+ reductase, at 486,553 to 487,323 _000451 ABIE53_000452: ABIE53_000452 - endonuclease/exonuclease/phosphatase family metal-dependent hydrolase, at 488,028 to 488,825 _000452 ABIE53_000453: ABIE53_000453 - hypothetical protein, at 488,982 to 489,521 _000453
Group Condition ABIE53_000449 ABIE53_000450 ABIE53_000451 ABIE53_000452 ABIE53_000453
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -1.7 -0.3 N.D. -0.7 -3.6
soil extract Indole-3-pyruvic 5 mM in soil extract -1.4 -0.6 N.D. -2.5 -0.9
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -1.0 -0.4 N.D. -0.7 -3.2
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -3.5 -0.7 N.D. -0.1 -0.5
plant outgrowth control Plant outgrowth control +0.1 +0.3 N.D. +0.7 -5.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.6 N.D. -0.2 -3.7
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -3.4 -0.4 N.D. +0.2 +0.6
stress R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM +1.0 +0.5 N.D. -0.4 -4.0
stress R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM +1.1 +0.1 N.D. -0.0 -3.7
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.6 +0.6 N.D. -0.9 -2.2
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +2.5 +0.7 N.D. +0.3 -3.5
carbon source m-Inositol (C) +1.4 +1.1 N.D. +1.2 -3.6
carbon source D-Gluconic Acid (C) +0.9 +1.1 N.D. +1.2 -1.7
carbon source D-Galacturonic Acid (C) +1.4 +0.9 N.D. +1.1 -1.5
stress RCH2_defined_glucose_5mM with Adenine 5 mM +1.9 +0.4 N.D. +1.1 -1.1
carbon source L-Proline (C) +1.4 +1.2 N.D. +0.8 -1.1
carbon source D-Trehalose (C) +1.8 +1.2 N.D. +0.9 -1.3
carbon source D-Glucose-6-Phosphate (C) +1.6 +1.2 N.D. +1.5 -1.7
stress RCH2_defined_glucose_5mM with Adenine 2 mM +1.9 +1.2 N.D. +1.2 -1.4
stress RCH2_defined_glucose_5mM with Adenine 4 mM +1.6 +1.3 N.D. +1.0 -1.0
stress RCH2_defined_glucose_5mM with Adenine 2 mM +2.3 +1.2 N.D. +1.0 -1.0
carbon source D-Glucose (C) +1.7 +1.7 N.D. +1.1 -0.9
carbon source D-Mannose (C) +2.3 +1.5 N.D. +0.9 -1.1
carbon source D-Galactose (C) +1.5 +1.9 N.D. +1.1 -0.1
carbon source D-Sorbitol (C) +1.9 +1.7 N.D. +1.0 -0.2
stress RCH2_defined_glucose_5mM with Adenine 4 mM +1.9 +0.9 N.D. +0.9 +0.9
carbon source L-Glutamine (C) +2.2 +1.6 N.D. +0.6 +0.3
carbon source L-Rhamnose (C) +1.7 +1.6 N.D. +0.8 +0.6
carbon source D-Galactose (C) +1.6 +1.6 N.D. +0.8 +0.7
carbon source L-Glutamine (C) +2.2 +1.7 N.D. +0.6 +0.8
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