Fitness for 5 genes in Paraburkholderia graminis OAS925

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 488 experiments or choose conditions or try the comparative fitness browser

500 ntABIE53_000402 and ABIE53_000403 are separated by 139 nucleotidesABIE53_000403 and ABIE53_000404 overlap by 4 nucleotidesABIE53_000404 and ABIE53_000405 are separated by 151 nucleotidesABIE53_000405 and ABIE53_000406 are separated by 377 nucleotides ABIE53_000402: ABIE53_000402 - penicillin-binding protein 2, at 433,062 to 435,581 _000402 ABIE53_000403: ABIE53_000403 - rod shape-determining protein MreD, at 435,721 to 436,233 _000403 ABIE53_000404: ABIE53_000404 - rod shape-determining protein MreC, at 436,230 to 437,354 _000404 ABIE53_000405: ABIE53_000405 - rod shape-determining protein MreB, at 437,506 to 438,549 _000405 ABIE53_000406: ABIE53_000406 - aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C, at 438,927 to 439,226 _000406
Group Condition ABIE53_000402 ABIE53_000403 ABIE53_000404 ABIE53_000405 ABIE53_000406
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM -4.4 -4.8 -0.7 N.D. N.D.
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 0.5 mM -4.4 -4.5 -0.7 N.D. N.D.
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -4.2 -4.8 -0.6 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -4.3 -3.8 -1.0 N.D. N.D.
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -4.1 -4.3 -0.7 N.D. N.D.
stress RCH2_defined_glucose_5mM with Ferulic Acid 5 mM -3.9 -4.8 -0.4 N.D. N.D.
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -3.8 -5.0 -0.1 N.D. N.D.
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -4.1 -3.7 -1.0 N.D. N.D.
stress RCH2_defined_glucose_5mM with Salicylic 5 mM -4.1 -3.9 -0.8 N.D. N.D.
carbon source Citric Acid (C) -4.0 -4.6 -0.0 N.D. N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.5 -4.6 -0.3 N.D. N.D.
carbon source D-Alanine (C) -3.7 -4.5 -0.1 N.D. N.D.
stress RCH2_defined_glucose_5mM with 4-Pyridoxic 5 mM -3.0 -4.8 -0.5 N.D. N.D.
carbon source Citric Acid (C) -3.7 -4.6 -0.0 N.D. N.D.
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM -3.5 -4.3 -0.5 N.D. N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.2 -4.6 -0.2 N.D. N.D.
stress RCH2_defined_glucose_5mM with 2,3-dihydroxybenzoic 5 mM -2.7 -4.7 -0.5 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.8 -3.3 -0.8 N.D. N.D.
stress RCH2_defined_glucose_5mM with Pyridoxal 0.5 mM -2.5 -4.7 -0.5 N.D. N.D.
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -2.9 -4.3 -0.3 N.D. N.D.
stress RCH2_defined_glucose_5mM with 2,3-dihydroxybenzoic 5 mM -2.1 -4.7 -0.7 N.D. N.D.
phage Burk2_10 -3.1 -4.1 -0.2 N.D. N.D.
stress RCH2_defined_glucose_5mM with homovanillyl alcohol 5 mM -2.0 -4.7 -0.7 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.7 -3.7 +0.0 N.D. N.D.
stress RCH2_defined_glucose_5mM with caffeic 1 mM -3.6 -3.5 -0.1 N.D. N.D.
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -2.5 -4.2 -0.5 N.D. N.D.
pH R2A pH 8.3 -2.4 -4.6 -0.1 N.D. N.D.
carbon source D,L-Malic Acid (C) -3.7 -3.7 +0.4 N.D. N.D.
carbon source Azelaic 20 mM (C) +4.1 +2.6 +0.9 N.D. N.D.
carbon source Azelaic 20 mM (C) +4.4 +3.3 +1.0 N.D. N.D.
remove
ABIE53_000402
plot		 remove
ABIE53_000403
plot		 remove
ABIE53_000404		 remove
ABIE53_000405
plot		 remove
ABIE53_000406
plot