Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_000340	ABIE53_000341	ABIE53_000342	ABIE53_000343	ABIE53_000344
plant outgrowth control	Plant outgrowth control	N.D.	-0.4	-0.9	-0.5	-0.7
plant outgrowth control	Plant outgrowth control	N.D.	-0.4	-0.8	-0.4	-0.7
carbon source	Acetylated xylan 10 g/L (C)	N.D.	-0.4	-0.6	-0.3	-0.5
carbon source	Shikimic Acid 5 mM (C)	N.D.	-0.3	-0.6	-0.4	-0.4
carbon source	Shikimic Acid 5 mM (C)	N.D.	-0.3	-0.6	-0.4	-0.4
r2a outgrowth control	R2A outgrowth control	N.D.	-0.4	-0.5	-0.4	-0.5
carbon source	Acetylated xylan 10 g/L (C)	N.D.	-0.3	-0.4	-0.6	-0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.4	-0.5	-0.3	-0.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.2	-0.5	-0.2	-0.5
stress	R2A with Tricalcium phosphate 0.5 g/L	N.D.	-0.3	-0.4	-0.3	-0.4
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.2	-0.8	-0.3	-0.0
carbon source	Laminarin 10 g/L (C)	N.D.	-0.2	-0.5	-0.2	-0.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.3	-0.1	-0.2	-0.6
plant outgrowth control	Plant outgrowth control	N.D.	-0.3	-0.2	-0.3	-0.4
carbon source	Laminarin 10 g/L (C)	N.D.	-0.2	-0.5	-0.2	-0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.1	-0.4	-0.2	-0.3
plant outgrowth control	Plant outgrowth control	N.D.	-0.1	-0.6	-0.0	-0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.3	-0.4	-0.1	-0.3
plant outgrowth control	Plant outgrowth control	N.D.	-0.3	-0.1	-0.2	-0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.1	-0.5	-0.2	-0.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.3	-0.7	-0.1	+0.0
plant outgrowth control	Plant outgrowth control	N.D.	-0.1	-0.4	-0.3	-0.2
r2a outgrowth control	R2A outgrowth control	N.D.	-0.2	-0.7	-0.1	-0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.0	-0.8	-0.0	-0.1
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.3	+0.1	-0.3	-0.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.1	-0.8	-0.0	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	N.D.	+0.3	-0.6	+0.1	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.1	+0.7	-0.2	+0.1
stress	M9 with 3-methyl-2-butenol 2 g/L	N.D.	+0.3	+0.2	+0.3	+0.3
stress	M9 with 3-methyl-2-butenol 2 g/L	N.D.	+0.3	+0.3	+0.3	+0.2