Fitness for 5 genes in Paraburkholderia graminis OAS925

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 488 experiments or choose conditions or try the comparative fitness browser

500 ntABIE53_000323 and ABIE53_000324 are separated by 86 nucleotidesABIE53_000324 and ABIE53_000325 are separated by 39 nucleotidesABIE53_000325 and ABIE53_000326 are separated by 273 nucleotidesABIE53_000326 and ABIE53_000327 are separated by 388 nucleotides ABIE53_000323: ABIE53_000323 - L-arabinose transport system ATP-binding protein, at 341,040 to 342,566 _000323 ABIE53_000324: ABIE53_000324 - L-arabinose transport system permease protein, at 342,653 to 343,657 _000324 ABIE53_000325: ABIE53_000325 - L-arabonate dehydrase, at 343,697 to 345,430 _000325 ABIE53_000326: ABIE53_000326 - hypothetical protein, at 345,704 to 346,042 _000326 ABIE53_000327: ABIE53_000327 - hypothetical protein, at 346,431 to 346,721 _000327
Group Condition ABIE53_000323 ABIE53_000324 ABIE53_000325 ABIE53_000326 ABIE53_000327
carbon source L-Arabinose (C) -2.0 -1.0 -3.9 +0.2 +0.1
carbon source L-Arabinose (C) -1.4 -0.8 -4.3 -0.0 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -0.6 -2.2 +0.3 -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -0.1 -0.9 -0.9 -0.7
carbon source Pectin 10 g/L (C) -0.5 -0.8 -1.3 -0.5 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -0.1 -1.8 -0.1 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -0.2 -0.9 -0.4 -0.4
carbon source Pectin 10 g/L (C) -0.9 -0.7 -0.8 +0.2 -0.1
in planta Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.4 +0.2 -1.0 -0.4 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -0.1 -1.0 -1.0 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -0.6 -1.7 +0.6 +0.1
plant outgrowth control Plant outgrowth control -0.4 +0.4 -0.4 -0.6 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.4 +0.2 -0.4 +0.5 -0.8
plant outgrowth control Plant outgrowth control +0.1 +0.4 +0.7 -1.0 -0.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.3 -0.2 -0.6 +1.1 -0.6
plant outgrowth control Plant outgrowth control -0.1 +0.7 +0.2 -1.1 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.0 -0.4 -0.4 +1.3 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.4 -0.4 -0.9 +2.2 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -0.2 -0.0 +1.0 +0.6
carbon source D-Lactate (C) +0.0 -0.3 +0.1 +1.2 +0.5
soil extract Indole-3-pyruvic 5 mM in soil extract +0.2 -0.2 +0.4 +1.0 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.4 -0.2 +0.2 +2.4 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -0.2 +0.3 +0.7 +1.3
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +0.1 +0.7 +0.3 +0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +0.5 +0.9 +0.4 +0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +0.1 +0.6 +1.2 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -0.2 +1.3 +1.1 +0.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.5 +1.1 +0.2 +0.8
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +0.3 +1.6 +1.0 +0.5
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +0.6 +1.5 +1.4 +0.4
remove
ABIE53_000323
plot		 remove
ABIE53_000324
plot		 remove
ABIE53_000325		 remove
ABIE53_000326
plot		 remove
ABIE53_000327
plot