Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_000282 and ABIE53_000283 are separated by 132 nucleotidesABIE53_000283 and ABIE53_000284 are separated by 63 nucleotidesABIE53_000284 and ABIE53_000285 are separated by 229 nucleotidesABIE53_000285 and ABIE53_000286 are separated by 97 nucleotides ABIE53_000282: ABIE53_000282 - two-component system OmpR family response regulator, at 298,751 to 299,437 _000282 ABIE53_000283: ABIE53_000283 - signal transduction histidine kinase, at 299,570 to 301,072 _000283 ABIE53_000284: ABIE53_000284 - SET domain-containing protein, at 301,136 to 301,693 _000284 ABIE53_000285: ABIE53_000285 - 2,4-dienoyl-CoA reductase-like NADH-dependent reductase (Old Yellow Enzyme family), at 301,923 to 303,035 _000285 ABIE53_000286: ABIE53_000286 - GMP synthase (glutamine-hydrolyzing), at 303,133 to 303,846 _000286
Group Condition ABIE53_000282 ABIE53_000283 ABIE53_000284 ABIE53_000285 ABIE53_000286
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -3.5 -2.4 +0.1 -0.1 -0.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -4.0 -3.3 +0.8 -0.2 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.2 -2.6 -0.0 -0.3 -0.2
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -2.7 -2.4 +0.2 -0.2 -0.5
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.6 -2.3 +0.0 -0.4 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.8 -2.7 +0.6 -0.2 -0.4
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -3.1 -1.5 -0.6 +0.0 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.5 -2.6 +1.2 +0.2 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.9 -2.6 +1.5 -0.2 -0.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.9 -2.3 +0.7 -0.2 -0.1
stress RCH2_defined_glucose_5mM with caffeic 1 mM -2.1 -1.4 -1.5 +0.2 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.9 -2.7 +1.2 -0.1 -0.2
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -2.5 -1.5 -0.7 +0.2 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -3.0 -3.0 +2.5 -0.3 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.1 -2.6 +2.2 +0.1 -0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -2.5 -3.0 +2.6 -0.4 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -2.6 -2.6 +2.8 -0.5 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -2.7 -2.5 +1.8 +0.1 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.0 -1.7 +1.7 -0.2 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.8 -1.5 +1.9 -0.2 -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -2.2 -2.2 +2.6 -0.3 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.9 -1.8 +2.7 -0.3 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.6 -1.5 +2.5 -0.4 -0.3
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.8 -1.3 +2.7 -0.9 -0.8
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -1.6 -1.1 +3.3 -0.3 -0.5
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.7 -1.4 +3.8 -0.9 -0.3
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -1.0 -0.9 +4.7 -1.6 -0.5
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.6 -1.1 +4.2 -0.2 -0.6
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.6 -0.2 +3.8 -0.5 -0.3
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.5 -0.8 +4.2 -0.1 -0.3
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