Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_000140	ABIE53_000141	ABIE53_000142	ABIE53_000143	ABIE53_000144
motility_chemotaxis	Motility_chemotaxis, R2A; outer cut	-0.1	-4.0	-4.5	N.D.	-0.9
motility_chemotaxis	Motility_chemotaxis, R2A; outer cut	-0.0	-3.7	-4.2	N.D.	-1.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.2	-3.7	-3.0	N.D.	-1.1
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	-3.4	-2.9	N.D.	-0.7
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.0	-2.5	-3.7	N.D.	-0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	-3.2	-2.5	N.D.	-0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.1	-2.7	-2.3	N.D.	-0.9
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.2	-2.4	-2.0	N.D.	-1.4
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.2	-2.3	-2.8	N.D.	+0.1
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.0	-1.4	-1.6	N.D.	-1.6
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.3	-1.9	-2.2	N.D.	-0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.2	-2.0	-2.5	N.D.	-0.1
carbon source	L-Proline (C)	-0.1	+1.8	+2.2	N.D.	+0.4
carbon source	L-Glutamine (C)	+0.0	+1.7	+2.1	N.D.	+0.6
carbon source	D-Glucuronic Acid (C)	-0.0	+1.7	+2.0	N.D.	+1.1
carbon source	L-Proline (C)	-0.1	+2.3	+2.4	N.D.	+0.6
carbon source	L-Glutamine (C)	+0.0	+2.3	+2.4	N.D.	+0.6
carbon source	D-Glucose-6-Phosphate (C)	+0.0	+2.1	+2.2	N.D.	+1.0
carbon source	D-Galactose (C)	+0.0	+2.5	+2.6	N.D.	+0.2
carbon source	D-Mannose (C)	+0.2	+2.3	+2.5	N.D.	+0.5
carbon source	m-Inositol (C)	-0.1	+2.7	+2.8	N.D.	+0.3
carbon source	D-Trehalose (C)	-0.1	+2.7	+2.7	N.D.	+0.5
carbon source	D-Galactose (C)	+0.0	+2.7	+2.9	N.D.	+0.2
r2a no shaking	R2A no shaking	-0.3	+2.7	+2.5	N.D.	+0.9
carbon source	D-Glucose (C)	+0.0	+2.7	+2.9	N.D.	+0.3
r2a no shaking	R2A no shaking	-0.1	+2.7	+2.6	N.D.	+0.7
carbon source	L-Histidine (C)	+0.1	+2.3	+3.0	N.D.	+0.7
carbon source	D-Sorbitol (C)	+0.2	+2.7	+3.0	N.D.	+0.3
carbon source	Xylitol (C)	-0.1	+2.9	+2.8	N.D.	+0.6
carbon source	D-Gluconic Acid (C)	+0.2	+2.7	+2.8	N.D.	+0.8