Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_000069 and ABIE53_000070 are separated by 46 nucleotidesABIE53_000070 and ABIE53_000071 are separated by 101 nucleotidesABIE53_000071 and ABIE53_000072 overlap by 4 nucleotidesABIE53_000072 and ABIE53_000073 are separated by 243 nucleotides ABIE53_000069: ABIE53_000069 - acyl-CoA reductase-like NAD-dependent aldehyde dehydrogenase, at 80,901 to 82,319 _000069 ABIE53_000070: ABIE53_000070 - type III secretion system FlhB-like substrate exporter, at 82,366 to 84,183 _000070 ABIE53_000071: ABIE53_000071 - flagellar protein FliT, at 84,285 to 84,611 _000071 ABIE53_000072: ABIE53_000072 - flagellar protein FliS, at 84,608 to 85,042 _000072 ABIE53_000073: ABIE53_000073 - flagellar hook-basal body complex protein FliE, at 85,286 to 85,636 _000073
Group Condition ABIE53_000069 ABIE53_000070 ABIE53_000071 ABIE53_000072 ABIE53_000073
motility_chemotaxis Motility_chemotaxis, R2A; outer cut +0.0 -0.7 N.D. -3.6 N.D.
motility_chemotaxis Motility_chemotaxis, R2A; outer cut +0.2 -0.5 N.D. -3.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.0 +0.2 N.D. -3.5 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.3 N.D. -3.0 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -0.6 N.D. -2.8 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -0.3 N.D. -2.5 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 +0.1 N.D. -2.2 N.D.
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.2 -0.5 N.D. -2.1 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 +0.1 N.D. -2.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -0.3 N.D. -2.1 N.D.
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.5 -0.4 N.D. -1.9 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.4 N.D. -2.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.1 +0.7 N.D. -2.0 N.D.
carbon source L-Proline (C) +0.1 +0.3 N.D. +2.0 N.D.
carbon source L-Glutamine (C) +0.1 +0.3 N.D. +2.1 N.D.
carbon source D-Fructose (C) +0.6 +0.2 N.D. +1.7 N.D.
carbon source D-Trehalose (C) +0.4 -0.0 N.D. +2.2 N.D.
carbon source L-Proline (C) +0.1 +0.2 N.D. +2.3 N.D.
r2a no shaking R2A no shaking -0.1 +0.2 N.D. +2.5 N.D.
carbon source D-Glucose-6-Phosphate (C) +0.5 +0.5 N.D. +1.7 N.D.
r2a no shaking R2A no shaking -0.1 +0.2 N.D. +2.6 N.D.
carbon source L-Histidine (C) +0.3 +0.4 N.D. +2.0 N.D.
carbon source D-Gluconic Acid (C) +0.5 +0.3 N.D. +2.2 N.D.
carbon source D-Galactose (C) +0.4 +0.2 N.D. +2.4 N.D.
carbon source D-Mannose (C) +0.6 +0.4 N.D. +2.0 N.D.
carbon source D-Glucose (C) +0.4 +0.5 N.D. +2.3 N.D.
carbon source Xylitol (C) +0.5 +0.3 N.D. +2.6 N.D.
carbon source D-Sorbitol (C) +0.5 +0.3 N.D. +2.7 N.D.
carbon source D-Galactose (C) +0.3 +0.6 N.D. +2.7 N.D.
carbon source m-Inositol (C) +0.3 +0.6 N.D. +2.7 N.D.
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