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Cofit
Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS19230 and ABIE51_RS19235 are separated by 58 nucleotides
ABIE51_RS19235 and ABIE51_RS19240 are separated by 246 nucleotides
ABIE51_RS19240 and ABIE51_RS19245 are separated by 82 nucleotides
ABIE51_RS19245 and ABIE51_RS19250 are separated by 8 nucleotides
ABIE51_RS19230: ABIE51_RS19230 - winged helix-turn-helix domain-containing protein, at 4,197,319 to 4,197,969
_RS19230
ABIE51_RS19235: ABIE51_RS19235 - outer membrane protein transport protein, at 4,198,028 to 4,199,380
_RS19235
ABIE51_RS19240: ABIE51_RS19240 - rhomboid family intramembrane serine protease, at 4,199,627 to 4,200,319
_RS19240
ABIE51_RS19245: ABIE51_RS19245 - DUF1820 family protein, at 4,200,402 to 4,200,722
_RS19245
ABIE51_RS19250: ABIE51_RS19250 - hypothetical protein, at 4,200,731 to 4,201,261
_RS19250
Group
Condition
ABIE51
_RS19230
ABIE51
_RS19235
ABIE51
_RS19240
ABIE51
_RS19245
ABIE51
_RS19250
carbon source
D-Glucose-6-Phosphate (C)
-0.1
-1.9
-0.5
+0.1
-0.1
stress
R2A with 3-octanone 5.31033333333333 mM
-0.2
-0.2
-0.9
-0.3
-0.3
carbon source
D-Galactose (C)
+0.0
-0.0
-1.6
+0.1
+0.1
carbon source
D-Cellobiose (C)
-0.1
-0.7
+0.4
+0.1
-0.2
carbon source
succinate (C)
-0.2
-0.7
+0.5
+0.1
-0.1
carbon source
L-Malic (C)
-0.0
+1.0
-0.2
-0.1
-0.3
carbon source
Ying_OrganicAcid7 rep C; time point 2
+0.0
+0.8
+0.4
+0.1
-0.2
carbon source
Ying_all64 rep A; time point 2
+0.1
+1.1
+0.1
+0.1
-0.0
carbon source
Ying_sugar7 rep A; time point 1
+0.0
+1.2
-0.0
+0.2
+0.0
carbon source
Ying_OrganicAcid7 rep A; time point 2
-0.0
+1.0
+0.4
+0.1
-0.0
carbon source
Ying_AminoAcid20 rep C; time point 1
-0.1
+1.3
+0.5
+0.1
-0.1
carbon source
Ying_AminoAcid20 rep A; time point 1
-0.1
+1.3
+0.3
+0.2
-0.0
carbon source
Ying_all64 rep A; time point 3
-0.1
+1.5
+0.1
+0.1
+0.2
carbon source
Ying_sugar7 rep C; time point 2
+0.0
+2.3
-0.7
+0.2
+0.0
carbon source
Ying_all64 rep B; time point 3
-0.3
+1.3
+0.7
+0.1
+0.0
carbon source
Ying_all64 rep C; time point 3
-0.1
+1.8
+0.1
+0.0
+0.1
carbon source
Ying_AminoAcid20 rep B; time point 1
-0.1
+1.3
+0.6
+0.1
-0.0
carbon source
Ying_sugar7 rep A; time point 2
-0.0
+2.3
-0.5
+0.1
+0.1
carbon source
Ying_sugar7 rep B; time point 2
+0.0
+2.2
-0.5
+0.2
-0.0
carbon source
Ying_all64 rep B; time point 2
+0.1
+1.2
+0.5
+0.2
-0.1
carbon source
Ying_all64 rep C; time point 2
+0.0
+1.3
+0.5
+0.1
+0.0
carbon source
Ying_AminoAcid20 rep A; time point 2
+0.0
+2.0
+0.4
+0.1
-0.1
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.0
+2.0
+0.3
+0.2
+0.0
carbon source
Ying_sugar7 rep B; time point 3
-0.1
+3.3
-0.8
+0.1
+0.0
carbon source
Ying_AminoAcid20 rep B; time point 2
+0.1
+2.0
+0.3
+0.1
-0.1
carbon source
Ying_sugar7 rep A; time point 3
-0.3
+3.4
-0.6
-0.0
+0.1
carbon source
Ying_sugar7 rep C; time point 3
-0.1
+3.4
-0.9
+0.1
+0.2
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.2
+2.7
+0.3
+0.2
+0.1
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.2
+2.7
+0.4
+0.1
+0.0
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.0
+2.7
+0.4
+0.2
+0.2
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ABIE51_RS19230
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ABIE51_RS19235
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ABIE51_RS19240
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ABIE51_RS19245
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ABIE51_RS19250
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