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Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS19130 and ABIE51_RS19135 are separated by 210 nucleotides
ABIE51_RS19135 and ABIE51_RS19140 are separated by 127 nucleotides
ABIE51_RS19140 and ABIE51_RS19145 are separated by 97 nucleotides
ABIE51_RS19145 and ABIE51_RS19150 are separated by 99 nucleotides
ABIE51_RS19130: ABIE51_RS19130 - 30S ribosomal protein S21, at 4,172,057 to 4,172,272
_RS19130
ABIE51_RS19135: ABIE51_RS19135 - GatB/YqeY domain-containing protein, at 4,172,483 to 4,172,929
_RS19135
ABIE51_RS19140: ABIE51_RS19140 - DNA primase, at 4,173,057 to 4,174,829
_RS19140
ABIE51_RS19145: ABIE51_RS19145 - hypothetical protein, at 4,174,927 to 4,175,436
_RS19145
ABIE51_RS19150: ABIE51_RS19150 - prolyl oligopeptidase family serine peptidase, at 4,175,536 to 4,177,506
_RS19150
Group
Condition
ABIE51
_RS19130
ABIE51
_RS19135
ABIE51
_RS19140
ABIE51
_RS19145
ABIE51
_RS19150
stress
R2A with 2-pentyl-furan 32.0526 mM
N.D.
-1.2
N.D.
-0.0
+0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
N.D.
-1.2
N.D.
+0.1
+0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
-1.0
N.D.
-0.1
+0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
-0.9
N.D.
+0.0
+0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
-0.9
N.D.
+0.0
+0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
N.D.
-1.0
N.D.
+0.2
+0.0
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
-0.8
N.D.
-0.0
+0.0
stress
R2A with 1-octen-3-ol 1.3568235 mM
N.D.
-0.9
N.D.
+0.1
+0.0
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
-0.9
N.D.
+0.1
+0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
-0.9
N.D.
+0.1
+0.0
stress
R2A with 2-pentyl-furan 32.0526 mM
N.D.
-0.9
N.D.
+0.2
+0.1
carbon source
Glucuronamide (C)
N.D.
-0.5
N.D.
-0.4
+0.1
stress
R2A with 1-octen-3-ol 1.3568235 mM
N.D.
-0.8
N.D.
+0.2
+0.0
stress
R2A with 1-octen-3-ol 1.3568235 mM
N.D.
-0.8
N.D.
+0.1
+0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
-0.7
N.D.
+0.1
+0.0
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
-0.8
N.D.
+0.1
+0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
-0.9
N.D.
+0.2
+0.1
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
N.D.
-0.2
N.D.
-0.3
-0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
-0.7
N.D.
-0.0
+0.1
stress
R2A with 2-pentyl-furan 10.6842 mM
N.D.
-0.6
N.D.
-0.0
+0.0
stress
R2A with 1-octen-3-ol 1.3568235 mM
N.D.
-0.7
N.D.
+0.1
+0.0
carbon source
D-Glucuronic Acid (C)
N.D.
-0.4
N.D.
-0.2
+0.0
carbon source
Ying_all64 rep B; time point 3
N.D.
-0.2
N.D.
-0.3
-0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
-0.8
N.D.
+0.3
+0.0
carbon source
L-Malic (C)
N.D.
-0.2
N.D.
-0.1
-0.2
stress
R2A with 2-pentyl-furan 10.6842 mM
N.D.
-0.6
N.D.
+0.1
+0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
-0.5
N.D.
+0.1
+0.0
stress
R2A with 2-pentyl-furan 10.6842 mM
N.D.
-0.4
N.D.
+0.1
-0.0
stress
R2A with 2-pentyl-furan 10.6842 mM
N.D.
-0.5
N.D.
+0.1
+0.1
carbon source
acetate (C)
N.D.
-0.1
N.D.
-0.3
+0.1
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