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Cofit
Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS18870 and ABIE51_RS18875 are separated by 266 nucleotides
ABIE51_RS18875 and ABIE51_RS18880 are separated by 82 nucleotides
ABIE51_RS18880 and ABIE51_RS18885 are separated by 165 nucleotides
ABIE51_RS18885 and ABIE51_RS18890 overlap by 4 nucleotides
ABIE51_RS18870: ABIE51_RS18870 - lysozyme inhibitor LprI family protein, at 4,104,149 to 4,104,715
_RS18870
ABIE51_RS18875: ABIE51_RS18875 - hypothetical protein, at 4,104,982 to 4,105,278
_RS18875
ABIE51_RS18880: ABIE51_RS18880 - AMP nucleosidase, at 4,105,361 to 4,106,137
_RS18880
ABIE51_RS18885: ABIE51_RS18885 - amidohydrolase, at 4,106,303 to 4,107,787
_RS18885
ABIE51_RS18890: ABIE51_RS18890 - amidohydrolase family protein, at 4,107,784 to 4,109,184
_RS18890
Group
Condition
ABIE51
_RS18870
ABIE51
_RS18875
ABIE51
_RS18880
ABIE51
_RS18885
ABIE51
_RS18890
carbon source
propionate (C)
-0.4
-0.4
-0.1
-0.1
-0.1
carbon source
D-Galactose (C)
-0.2
-0.2
-0.3
-0.1
-0.1
carbon source
Ying_all64 rep A; time point 3
-0.4
-0.1
-0.2
-0.1
-0.1
carbon source
Fumarate (C)
-0.1
-0.2
-0.0
-0.4
-0.1
carbon source
D-Galactose (C)
-0.5
-0.2
-0.1
-0.0
+0.1
carbon source
D-Maltose (C)
-0.2
-0.4
-0.1
+0.1
-0.0
carbon source
Ying_Others16 rep B; time point 1
+0.1
-0.5
-0.2
-0.1
+0.0
carbon source
L-Glutamine (C)
-0.0
-0.3
-0.4
-0.1
+0.2
carbon source
L-Tryptophan (C)
-0.2
-0.4
+0.1
+0.1
-0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.1
-0.2
-0.4
+0.2
-0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.2
-0.0
-0.4
+0.0
-0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.3
-0.0
-0.4
+0.0
-0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.3
-0.1
-0.3
+0.0
-0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.2
-0.2
-0.2
+0.1
-0.1
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.3
-0.1
-0.3
+0.1
-0.0
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.3
+0.0
-0.4
-0.0
+0.0
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.3
+0.0
-0.3
+0.1
-0.1
carbon source
acetate (C)
+0.2
-0.6
-0.1
+0.1
+0.4
dmso control
DMSO control
+0.3
+0.1
-0.2
-0.1
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
+0.4
-0.0
-0.2
+0.1
-0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.4
-0.1
-0.3
+0.1
-0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.4
-0.1
-0.3
+0.1
-0.0
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.4
-0.1
-0.3
+0.1
+0.2
carbon source
D-Glucuronic Acid (C)
+0.3
-0.3
-0.0
-0.0
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.4
+0.0
-0.3
+0.0
+0.0
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.3
-0.1
-0.3
+0.1
+0.2
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.4
+0.1
-0.2
+0.1
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
+0.4
-0.0
-0.2
+0.1
+0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.4
+0.1
-0.3
+0.1
+0.1
stress
R2A with 2-pentyl-furan 10.6842 mM
+0.4
+0.3
-0.1
+0.1
+0.1
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ABIE51_RS18870
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ABIE51_RS18875
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ABIE51_RS18880
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