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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS18635 and ABIE51_RS18640 are separated by 40 nucleotides
ABIE51_RS18640 and ABIE51_RS18645 are separated by 133 nucleotides
ABIE51_RS18645 and ABIE51_RS18650 are separated by 324 nucleotides
ABIE51_RS18650 and ABIE51_RS18655 are separated by 332 nucleotides
ABIE51_RS18635: ABIE51_RS18635 - bifunctional helix-turn-helix transcriptional regulator/GNAT family N-acetyltransferase, at 4,052,858 to 4,053,742
_RS18635
ABIE51_RS18640: ABIE51_RS18640 - hypothetical protein, at 4,053,783 to 4,054,007
_RS18640
ABIE51_RS18645: ABIE51_RS18645 - S8 family serine peptidase, at 4,054,141 to 4,056,903
_RS18645
ABIE51_RS18650: ABIE51_RS18650 - amidohydrolase family protein, at 4,057,228 to 4,058,556
_RS18650
ABIE51_RS18655: ABIE51_RS18655 - RcnB family protein, at 4,058,889 to 4,059,227
_RS18655
Group
Condition
ABIE51
_RS18635
ABIE51
_RS18640
ABIE51
_RS18645
ABIE51
_RS18650
ABIE51
_RS18655
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.5
-0.2
-0.0
+0.0
+0.1
carbon source
L-Malic (C)
-0.3
-0.1
-0.1
-0.2
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.3
-0.2
-0.0
-0.0
-0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.2
-0.2
-0.0
-0.0
-0.1
r2a no stress control
R2A no stress control
-0.3
-0.2
-0.0
+0.1
-0.1
dmso control
DMSO control
-0.3
-0.1
-0.0
+0.0
-0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.1
-0.2
-0.0
+0.1
-0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.2
-0.1
-0.0
-0.1
+0.1
carbon source
Ying_Others16 rep B; time point 1
-0.0
-0.1
+0.0
+0.1
-0.3
dmso control
DMSO control
-0.2
-0.1
-0.1
+0.0
+0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.1
-0.2
-0.0
+0.1
-0.1
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.2
-0.2
-0.0
+0.0
+0.1
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.2
-0.1
-0.0
+0.1
-0.0
carbon source
Ying_Others16 rep A; time point 1
-0.1
-0.1
-0.1
+0.2
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.1
-0.1
-0.0
+0.2
-0.1
carbon source
Ying_all64 rep B; time point 3
-0.2
+0.1
+0.0
-0.2
+0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.3
-0.1
-0.1
+0.1
+0.2
carbon source
acetate (C)
+0.1
-0.3
-0.1
+0.1
+0.1
carbon source
Ying_OrganicAcid7 rep B; time point 2
-0.2
-0.1
+0.0
+0.1
+0.0
stress
R2A with 3-octanone 5.31033333333333 mM
+0.1
-0.1
-0.1
+0.1
-0.1
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.2
+0.1
+0.0
-0.1
+0.1
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
+0.2
-0.1
+0.1
-0.1
-0.0
carbon source
Fumarate (C)
+0.2
+0.1
+0.1
-0.1
-0.2
stress
R2A with 3-octanone 5.31033333333333 mM
+0.3
-0.0
+0.0
-0.1
-0.1
carbon source
Ying_Others16 rep C; time point 1
+0.1
-0.2
+0.0
+0.2
+0.2
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
+0.2
-0.0
+0.1
+0.2
-0.1
carbon source
Ying_AminoAcid20 rep C; time point 2
-0.1
+0.0
+0.1
+0.2
+0.1
carbon source
L-Glutamine (C)
+0.2
+0.1
-0.1
+0.1
+0.0
carbon source
Glucuronamide (C)
+0.4
-0.1
-0.1
+0.2
+0.0
carbon source
Ying_all64 rep B; time point 1
+0.1
+0.0
+0.0
+0.2
+0.1
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