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Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS16820 and ABIE51_RS16825 overlap by 4 nucleotides
ABIE51_RS16825 and ABIE51_RS16830 are separated by 158 nucleotides
ABIE51_RS16830 and ABIE51_RS16835 are separated by 10 nucleotides
ABIE51_RS16835 and ABIE51_RS16840 are separated by 193 nucleotides
ABIE51_RS16820: ABIE51_RS16820 - flagellar motor switch protein FliN, at 3,656,933 to 3,657,265
_RS16820
ABIE51_RS16825: ABIE51_RS16825 - flagellar biosynthetic protein FliO, at 3,657,262 to 3,657,942
_RS16825
ABIE51_RS16830: ABIE51_RS16830 - flagellar type III secretion system pore protein FliP, at 3,658,101 to 3,658,952
_RS16830
ABIE51_RS16835: ABIE51_RS16835 - flagellar biosynthetic protein FliQ, at 3,658,963 to 3,659,232
_RS16835
ABIE51_RS16840: ABIE51_RS16840 - flagellar biosynthetic protein FliR, at 3,659,426 to 3,660,214
_RS16840
Group
Condition
ABIE51
_RS16820
ABIE51
_RS16825
ABIE51
_RS16830
ABIE51
_RS16835
ABIE51
_RS16840
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-3.2
N.D.
-2.8
N.D.
-2.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-2.8
N.D.
-2.7
N.D.
-2.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-2.6
N.D.
-2.6
N.D.
-2.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-2.4
N.D.
-2.3
N.D.
-2.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-2.4
N.D.
-2.2
N.D.
-2.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-2.5
N.D.
-2.1
N.D.
-1.9
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-2.0
N.D.
-2.3
N.D.
-2.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
-2.4
N.D.
-1.8
N.D.
-1.8
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
-2.2
N.D.
-1.8
N.D.
-1.8
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
-2.1
N.D.
-1.9
N.D.
-1.8
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
-2.3
N.D.
-1.8
N.D.
-1.7
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-2.1
N.D.
-1.7
N.D.
-1.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-1.8
N.D.
-1.0
N.D.
-1.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-1.9
N.D.
-0.9
N.D.
-1.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-1.9
N.D.
-0.9
N.D.
-1.0
stress
R2A with 3-octanone 1.77016666666667 mM
-1.7
N.D.
-1.1
N.D.
-1.0
stress
R2A with 2-pentyl-furan 10.6842 mM
-1.5
N.D.
-1.0
N.D.
-1.2
stress
R2A with 2-pentyl-furan 10.6842 mM
-1.5
N.D.
-1.0
N.D.
-1.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-1.6
N.D.
-0.8
N.D.
-1.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-1.6
N.D.
-1.0
N.D.
-1.0
stress
R2A with 2-pentyl-furan 10.6842 mM
-1.3
N.D.
-1.2
N.D.
-1.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-1.7
N.D.
-0.8
N.D.
-1.0
r2a no stress control
R2A no stress control
-1.6
N.D.
-0.9
N.D.
-1.0
r2a no stress control
R2A no stress control
-1.5
N.D.
-1.1
N.D.
-0.8
r2a no stress control
R2A no stress control
-1.4
N.D.
-1.0
N.D.
-0.8
stress
R2A with 2-pentyl-furan 10.6842 mM
-1.4
N.D.
-1.0
N.D.
-1.0
dmso control
DMSO control
-1.5
N.D.
-0.9
N.D.
-0.8
r2a no stress control
R2A no stress control
-1.3
N.D.
-1.0
N.D.
-0.8
dmso control
DMSO control
-1.3
N.D.
-1.0
N.D.
-0.8
stress
R2A with 3-octanone 2.65516666666667 mM
-1.1
N.D.
-1.0
N.D.
-1.0
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