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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS16440 and ABIE51_RS16445 are separated by 72 nucleotides
ABIE51_RS16445 and ABIE51_RS16450 are separated by 81 nucleotides
ABIE51_RS16450 and ABIE51_RS16455 are separated by 77 nucleotides
ABIE51_RS16455 and ABIE51_RS16460 are separated by 217 nucleotides
ABIE51_RS16440: ABIE51_RS16440 - TonB-dependent receptor, at 3,574,361 to 3,576,502
_RS16440
ABIE51_RS16445: ABIE51_RS16445 - PepSY-associated TM helix domain-containing protein, at 3,576,575 to 3,577,603
_RS16445
ABIE51_RS16450: ABIE51_RS16450 - tRNA dihydrouridine synthase DusB, at 3,577,685 to 3,578,695
_RS16450
ABIE51_RS16455: ABIE51_RS16455 - class I SAM-dependent methyltransferase, at 3,578,773 to 3,579,609
_RS16455
ABIE51_RS16460: ABIE51_RS16460 - hypothetical protein, at 3,579,827 to 3,580,144
_RS16460
Group
Condition
ABIE51
_RS16440
ABIE51
_RS16445
ABIE51
_RS16450
ABIE51
_RS16455
ABIE51
_RS16460
carbon source
Ying_AminoAcid20 rep A; time point 1
-0.1
-0.4
+0.1
-0.7
-0.1
carbon source
2-Deoxy-D-Ribose (C)
-0.1
-0.5
-0.3
+0.1
-0.2
carbon source
Ying_sugar7 rep A; time point 3
-0.1
+0.0
-0.3
-0.6
+0.2
carbon source
Ying_OrganicAcid7 rep B; time point 1
-0.1
+0.4
-0.2
-0.8
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-0.1
-0.1
-0.2
-0.5
+0.2
carbon source
casaminos (C)
-0.1
-0.1
+0.1
-0.8
+0.1
carbon source
D-Cellobiose (C)
-0.0
-0.2
+0.4
-0.7
-0.2
carbon source
Glucuronamide (C)
+0.0
-0.8
+0.2
-0.1
+0.2
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.1
-0.3
-0.3
+0.3
-0.1
carbon source
Ying_Others16 rep B; time point 1
+0.1
+0.3
+0.1
-0.6
-0.3
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.1
+0.1
-0.4
+0.3
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-0.0
+0.2
-0.0
-0.5
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-0.1
+0.0
+0.2
-0.6
+0.4
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.0
+0.1
-0.4
+0.4
-0.1
stress
R2A with 3-octanone 2.65516666666667 mM
-0.1
+0.2
-0.3
-0.1
+0.4
carbon source
Fumarate (C)
-0.0
+0.6
+0.4
-0.6
-0.2
carbon source
L-Glutamine (C)
+0.2
+0.2
+0.5
-0.4
-0.1
stress
R2A with 3-octanone 2.65516666666667 mM
-0.1
+0.2
-0.2
+0.2
+0.2
carbon source
D-Galactose (C)
+0.0
+0.4
+0.4
-0.3
-0.1
carbon source
Ying_Nucleobase14 rep B; time point 1
+0.1
+0.4
-0.1
+0.4
-0.3
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.1
+0.2
-0.2
+0.5
-0.1
carbon source
D-Glucuronic Acid (C)
+0.2
-0.6
+0.3
+0.5
+0.1
carbon source
Ying_Others16 rep A; time point 1
+0.0
+0.1
-0.4
+0.6
+0.2
carbon source
D-Maltose (C)
-0.0
-0.2
+0.3
+0.4
+0.4
carbon source
D-Maltose (C)
-0.0
+0.4
+0.0
+0.5
-0.0
stress
R2A with 3-octanone 1.77016666666667 mM
-0.1
+0.0
+0.2
+0.6
+0.3
carbon source
D-Glucose-6-Phosphate (C)
+0.1
-0.1
+0.5
+0.6
-0.1
carbon source
pyruvate (C)
+0.1
+0.2
+0.4
+0.7
-0.2
carbon source
L-Malic (C)
-0.0
+0.6
+0.4
+0.3
+0.0
carbon source
L-Asparagine (C)
+0.1
+0.2
+0.5
+0.2
+0.3
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