Fitness for 5 genes in Lysobacter sp. OAE881

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 143 experiments or choose conditions or try the comparative fitness browser

500 ntABIE51_RS16395 and ABIE51_RS16400 are separated by 240 nucleotidesABIE51_RS16400 and ABIE51_RS16405 are separated by 41 nucleotidesABIE51_RS16405 and ABIE51_RS16410 are separated by 186 nucleotidesABIE51_RS16410 and ABIE51_RS16415 are separated by 74 nucleotides ABIE51_RS16395: ABIE51_RS16395 - PDZ domain-containing protein, at 3,563,278 to 3,564,498 _RS16395 ABIE51_RS16400: ABIE51_RS16400 - DUF6607 family protein, at 3,564,739 to 3,565,686 _RS16400 ABIE51_RS16405: ABIE51_RS16405 - TonB-dependent hemoglobin/transferrin/lactoferrin family receptor, at 3,565,728 to 3,568,022 _RS16405 ABIE51_RS16410: ABIE51_RS16410 - hemin uptake protein HemP, at 3,568,209 to 3,568,448 _RS16410 ABIE51_RS16415: ABIE51_RS16415 - aldo/keto reductase, at 3,568,523 to 3,569,491 _RS16415
Group Condition ABIE51_RS16395 ABIE51_RS16400 ABIE51_RS16405 ABIE51_RS16410 ABIE51_RS16415
carbon source Ying_AminoAcid20 rep A; time point 2 -4.0 -0.1 -0.3 -0.1 -3.1
carbon source Ying_AminoAcid20 rep B; time point 2 -3.9 -0.3 -0.3 -0.1 -3.1
carbon source Ying_AminoAcid20 rep C; time point 2 -4.0 -0.1 -0.2 +0.0 -2.9
carbon source Ying_AminoAcid20 rep A; time point 1 -3.9 -0.1 -0.2 -0.0 -2.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -5.0 +0.1 -0.1 -0.9 -0.4
carbon source Ying_AminoAcid20 rep C; time point 1 -4.0 -0.2 -0.0 +0.1 -2.2
carbon source Ying_all64 rep A; time point 2 -4.1 -0.1 -0.4 -0.1 -1.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -4.8 -0.1 -0.1 -0.6 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -4.7 +0.0 -0.0 -0.8 -0.5
carbon source Ying_AminoAcid20 rep B; time point 1 -4.0 -0.1 -0.1 +0.2 -2.1
carbon source Ying_all64 rep C; time point 2 -3.9 -0.1 -0.2 -0.0 -1.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -4.8 +0.2 +0.1 -0.8 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -4.6 -0.1 -0.0 -0.7 -0.5
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -4.7 +0.0 -0.1 -0.3 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -4.8 -0.0 +0.0 -0.4 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -4.9 +0.1 +0.1 -0.5 -0.4
carbon source Ying_all64 rep B; time point 2 -3.4 +0.0 -0.2 -0.3 -1.7
carbon source Ying_sugar7 rep C; time point 2 -4.1 +0.0 -0.0 +0.0 -1.5
carbon source Ying_sugar7 rep B; time point 2 -4.1 +0.1 -0.1 -0.1 -1.4
carbon source Ying_OrganicAcid7 rep B; time point 2 -4.1 -0.0 -0.2 -0.2 -1.0
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -4.6 -0.0 +0.0 -0.4 -0.5
carbon source Ying_sugar7 rep A; time point 2 -4.1 +0.1 -0.0 -0.0 -1.4
carbon source Ying_AminoAcid20 rep B; time point 3 -1.7 -0.2 -0.1 +0.2 -3.6
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -4.5 -0.0 +0.1 -0.1 -0.6
carbon source Ying_AminoAcid20 rep C; time point 3 -1.6 -0.3 -0.2 +0.4 -3.5
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -4.7 +0.1 +0.0 -0.1 -0.3
carbon source Ying_AminoAcid20 rep A; time point 3 -1.7 -0.1 -0.1 +0.3 -3.4
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus -3.8 +0.2 +0.1 -0.6 -0.6
stress R2A with 2-pentyl-furan 32.0526 mM -4.1 -0.1 +0.3 +0.9 -0.1
stress R2A with 2-pentyl-furan 32.0526 mM -4.2 +0.1 +0.1 +1.1 +0.1
remove
ABIE51_RS16395
plot		 remove
ABIE51_RS16400
plot		 remove
ABIE51_RS16405		 remove
ABIE51_RS16410
plot		 remove
ABIE51_RS16415
plot