Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS16200 and ABIE51_RS16205 are separated by 942 nucleotidesABIE51_RS16205 and ABIE51_RS16210 are separated by 573 nucleotidesABIE51_RS16210 and ABIE51_RS16215 overlap by 1 nucleotidesABIE51_RS16215 and ABIE51_RS16220 are separated by 10 nucleotides ABIE51_RS16200: ABIE51_RS16200 - peptidoglycan DD-metalloendopeptidase family protein, at 3,514,676 to 3,515,605 _RS16200 ABIE51_RS16205: ABIE51_RS16205 - HDOD domain-containing protein, at 3,516,548 to 3,517,630 _RS16205 ABIE51_RS16210: ABIE51_RS16210 - peptide chain release factor 3, at 3,518,204 to 3,519,808 _RS16210 ABIE51_RS16215: ABIE51_RS16215 - DUF1294 domain-containing protein, at 3,519,808 to 3,520,086 _RS16215 ABIE51_RS16220: ABIE51_RS16220 - aspartyl/asparaginyl beta-hydroxylase domain-containing protein, at 3,520,097 to 3,520,741 _RS16220
Group Condition ABIE51_RS16200 ABIE51_RS16205 ABIE51_RS16210 ABIE51_RS16215 ABIE51_RS16220
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media +0.1 -0.1 N.D. -1.5 -0.1
carbon source Ying_all64 rep B; time point 2 +0.1 -0.1 N.D. -1.1 -0.4
stress R2A with 1-octen-3-ol 1.08545883333333 mM +0.1 -0.1 N.D. -1.2 -0.1
stress R2A with 1-octen-3-ol 1.3568235 mM +0.1 -0.2 N.D. -0.8 -0.3
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.2 -0.1 N.D. -1.0 -0.2
stress R2A with 1-octen-3-ol 1.08545883333333 mM +0.1 -0.2 N.D. -0.8 -0.0
carbon source Ying_AminoAcid20 rep B; time point 2 +0.1 -0.1 N.D. -0.8 -0.3
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.1 +0.1 N.D. -0.9 -0.1
carbon source Ying_all64 rep A; time point 3 +0.1 -0.0 N.D. -1.1 +0.1
carbon source Ying_AminoAcid20 rep B; time point 1 +0.1 +0.0 N.D. -1.0 +0.1
dmso control DMSO control +0.1 -0.0 N.D. -0.9 +0.1
stress R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM +0.3 -0.1 N.D. -0.8 +0.0
carbon source Ying_sugar7 rep A; time point 1 +0.1 +0.1 N.D. -0.9 +0.3
carbon source L-Malic (C) -0.0 +0.3 N.D. -0.8 +0.2
carbon source Ying_sugar7 rep A; time point 3 +0.3 +0.2 N.D. -0.6 +0.1
carbon source Ying_sugar7 rep C; time point 3 +0.4 +0.1 N.D. -0.6 +0.2
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.2 +0.3 N.D. +0.4 -0.4
carbon source pyruvate (C) -0.5 +0.2 N.D. +0.8 -0.1
carbon source casaminos (C) -0.3 +0.1 N.D. +0.4 +0.4
carbon source L-tyrosine (C) -0.1 +0.2 N.D. +0.7 -0.2
carbon source acetate (C) +0.4 -0.2 N.D. +0.6 -0.1
carbon source L-Tryptophan (C) -0.0 +0.3 N.D. +1.0 -0.1
carbon source D-Cellobiose (C) +0.8 -0.0 N.D. +0.5 -0.1
carbon source L-Asparagine (C) -1.0 +0.1 N.D. +1.9 +0.2
carbon source Fumarate (C) +0.1 -0.2 N.D. +1.2 +0.2
carbon source D-Glucose-6-Phosphate (C) +0.3 +0.1 N.D. +0.4 +0.5
carbon source L-Glutamine (C) +0.1 -0.2 N.D. +1.1 +0.5
carbon source D-Glucuronic Acid (C) -0.0 +0.1 N.D. +1.1 +0.4
carbon source D-Glucose-6-Phosphate (C) -0.3 +0.1 N.D. +1.6 +0.3
carbon source succinate (C) -0.3 +0.1 N.D. +1.5 +0.3
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