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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS16130 and ABIE51_RS16135 are separated by 539 nucleotides
ABIE51_RS16135 and ABIE51_RS16140 are separated by 41 nucleotides
ABIE51_RS16140 and ABIE51_RS16145 are separated by 104 nucleotides
ABIE51_RS16145 and ABIE51_RS16150 are separated by 293 nucleotides
ABIE51_RS16130: ABIE51_RS16130 - YceI family protein, at 3,494,378 to 3,494,947
_RS16130
ABIE51_RS16135: ABIE51_RS16135 - hypothetical protein, at 3,495,487 to 3,495,681
_RS16135
ABIE51_RS16140: ABIE51_RS16140 - glutaredoxin family protein, at 3,495,723 to 3,495,977
_RS16140
ABIE51_RS16145: ABIE51_RS16145 - L-serine ammonia-lyase, at 3,496,082 to 3,497,479
_RS16145
ABIE51_RS16150: ABIE51_RS16150 - EAL domain-containing protein, at 3,497,773 to 3,500,169
_RS16150
Group
Condition
ABIE51
_RS16130
ABIE51
_RS16135
ABIE51
_RS16140
ABIE51
_RS16145
ABIE51
_RS16150
carbon source
Fumarate (C)
-0.6
N.D.
N.D.
-0.2
-0.1
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.1
N.D.
N.D.
-0.5
-0.1
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.1
N.D.
N.D.
-0.5
-0.1
carbon source
D-Maltose (C)
-0.4
N.D.
N.D.
-0.1
-0.1
stress
R2A with 2-pentyl-furan 10.6842 mM
+0.0
N.D.
N.D.
-0.5
-0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.0
N.D.
N.D.
-0.6
-0.0
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.2
N.D.
N.D.
-0.4
+0.0
carbon source
Fumarate (C)
-0.3
N.D.
N.D.
-0.4
+0.2
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.1
N.D.
N.D.
-0.6
+0.1
carbon source
Ying_AminoAcid20 rep B; time point 2
-0.1
N.D.
N.D.
-0.4
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.1
N.D.
N.D.
-0.4
+0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.1
N.D.
N.D.
-0.6
-0.0
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.0
N.D.
N.D.
-0.6
+0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.1
N.D.
N.D.
-0.5
+0.0
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.1
N.D.
N.D.
-0.6
+0.1
stress
R2A with 2-pentyl-furan 10.6842 mM
+0.2
N.D.
N.D.
-0.6
-0.1
carbon source
Ying_AminoAcid20 rep A; time point 1
-0.5
N.D.
N.D.
-0.0
+0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.2
N.D.
N.D.
-0.2
+0.1
stress
R2A with 3-octanone 1.77016666666667 mM
-0.1
N.D.
N.D.
-0.4
+0.2
carbon source
Ying_AminoAcid20 rep C; time point 3
+0.2
N.D.
N.D.
-0.4
+0.0
stress
R2A with 2-pentyl-furan 10.6842 mM
+0.2
N.D.
N.D.
-0.4
+0.0
dmso control
DMSO control
+0.2
N.D.
N.D.
-0.3
-0.1
carbon source
Ying_OrganicAcid7 rep B; time point 2
-0.5
N.D.
N.D.
+0.1
+0.1
carbon source
Ying_sugar7 rep C; time point 1
-0.4
N.D.
N.D.
+0.1
+0.1
carbon source
Ying_OrganicAcid7 rep C; time point 2
-0.4
N.D.
N.D.
+0.1
+0.1
carbon source
L-Malic (C)
-0.2
N.D.
N.D.
+0.4
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
+0.2
N.D.
N.D.
-0.3
+0.1
carbon source
Ying_all64 rep B; time point 1
-0.3
N.D.
N.D.
+0.1
+0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.2
N.D.
N.D.
-0.3
+0.1
carbon source
D-Cellobiose (C)
-0.1
N.D.
N.D.
+0.4
-0.2
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