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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS16090 and ABIE51_RS16095 are separated by 22 nucleotides
ABIE51_RS16095 and ABIE51_RS16100 are separated by 113 nucleotides
ABIE51_RS16100 and ABIE51_RS16105 are separated by 37 nucleotides
ABIE51_RS16105 and ABIE51_RS16110 are separated by 129 nucleotides
ABIE51_RS16090: ABIE51_RS16090 - kinase, at 3,484,688 to 3,485,494
_RS16090
ABIE51_RS16095: ABIE51_RS16095 - shikimate kinase, at 3,485,517 to 3,486,041
_RS16095
ABIE51_RS16100: ABIE51_RS16100 - 3-dehydroquinate synthase, at 3,486,155 to 3,487,261
_RS16100
ABIE51_RS16105: ABIE51_RS16105 - WGR domain-containing protein, at 3,487,299 to 3,487,553
_RS16105
ABIE51_RS16110: ABIE51_RS16110 - uroporphyrinogen decarboxylase, at 3,487,683 to 3,488,753
_RS16110
Group
Condition
ABIE51
_RS16090
ABIE51
_RS16095
ABIE51
_RS16100
ABIE51
_RS16105
ABIE51
_RS16110
carbon source
casaminos (C)
-0.2
-3.7
N.D.
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 2
-0.1
-3.8
N.D.
N.D.
N.D.
carbon source
Ying_sugar7 rep C; time point 2
+0.1
-3.9
N.D.
N.D.
N.D.
carbon source
Ying_sugar7 rep A; time point 1
+0.2
-3.9
N.D.
N.D.
N.D.
carbon source
Ying_sugar7 rep A; time point 2
+0.2
-3.8
N.D.
N.D.
N.D.
carbon source
Ying_sugar7 rep B; time point 2
+0.3
-3.8
N.D.
N.D.
N.D.
carbon source
D-Galactose (C)
-0.1
-3.3
N.D.
N.D.
N.D.
carbon source
casaminos (C)
+0.1
-3.3
N.D.
N.D.
N.D.
carbon source
acetate (C)
-0.2
-2.5
N.D.
N.D.
N.D.
carbon source
D-Glucose-6-Phosphate (C)
+0.3
-2.9
N.D.
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 2
+0.0
-2.6
N.D.
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 1
-0.3
-2.3
N.D.
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 1
-0.0
-2.4
N.D.
N.D.
N.D.
carbon source
Ying_sugar7 rep A; time point 3
+0.6
-2.9
N.D.
N.D.
N.D.
carbon source
Ying_sugar7 rep C; time point 3
+0.7
-3.0
N.D.
N.D.
N.D.
carbon source
Ying_sugar7 rep B; time point 3
+0.6
-2.9
N.D.
N.D.
N.D.
carbon source
D-Maltose (C)
+0.5
-2.5
N.D.
N.D.
N.D.
carbon source
Fumarate (C)
+0.1
-2.0
N.D.
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 2
+0.2
-2.0
N.D.
N.D.
N.D.
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.1
-1.8
N.D.
N.D.
N.D.
carbon source
Ying_sugar7 rep C; time point 1
+0.2
-1.9
N.D.
N.D.
N.D.
carbon source
D-Glucose-6-Phosphate (C)
+0.3
-2.0
N.D.
N.D.
N.D.
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.0
-1.7
N.D.
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 2
+0.4
-1.9
N.D.
N.D.
N.D.
carbon source
D-Galactose (C)
+0.3
-1.8
N.D.
N.D.
N.D.
carbon source
L-Asparagine (C)
+0.2
-1.7
N.D.
N.D.
N.D.
stress
R2A with 2-pentyl-furan 10.6842 mM
+0.2
-1.5
N.D.
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 3
+0.3
-1.3
N.D.
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 1
+0.6
-1.1
N.D.
N.D.
N.D.
carbon source
L-Malic (C)
-0.9
+1.2
N.D.
N.D.
N.D.
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