Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS16010 and ABIE51_RS16015 are separated by 228 nucleotidesABIE51_RS16015 and ABIE51_RS16020 overlap by 4 nucleotidesABIE51_RS16020 and ABIE51_RS16025 overlap by 1 nucleotidesABIE51_RS16025 and ABIE51_RS16030 are separated by 88 nucleotides ABIE51_RS16010: ABIE51_RS16010 - prolyl oligopeptidase family serine peptidase, at 3,466,785 to 3,467,615 _RS16010 ABIE51_RS16015: ABIE51_RS16015 - aspartate carbamoyltransferase catalytic subunit, at 3,467,844 to 3,468,767 _RS16015 ABIE51_RS16020: ABIE51_RS16020 - Holliday junction resolvase RuvX, at 3,468,764 to 3,469,291 _RS16020 ABIE51_RS16025: ABIE51_RS16025 - YqgE/AlgH family protein, at 3,469,291 to 3,469,857 _RS16025 ABIE51_RS16030: ABIE51_RS16030 - Zn-dependent hydrolase, at 3,469,946 to 3,471,646 _RS16030
Group Condition ABIE51_RS16010 ABIE51_RS16015 ABIE51_RS16020 ABIE51_RS16025 ABIE51_RS16030
carbon source Ying_sugar7 rep B; time point 2 -0.1 -3.7 N.D. -1.2 +0.0
carbon source D-Galactose (C) -1.2 -2.5 N.D. -1.1 +0.1
carbon source Ying_sugar7 rep A; time point 3 -0.8 -2.8 N.D. -1.1 -0.0
carbon source Ying_sugar7 rep C; time point 3 -0.2 -2.8 N.D. -1.5 -0.1
carbon source Ying_AminoAcid20 rep C; time point 1 -0.0 -4.1 N.D. -0.5 +0.1
carbon source Ying_sugar7 rep C; time point 2 +0.3 -3.8 N.D. -1.1 -0.0
carbon source Ying_AminoAcid20 rep B; time point 1 +0.0 -4.0 N.D. -0.4 -0.0
carbon source Ying_AminoAcid20 rep A; time point 2 -0.1 -3.7 N.D. -0.6 +0.0
carbon source Ying_sugar7 rep A; time point 2 +0.1 -3.7 N.D. -0.8 +0.1
carbon source Ying_AminoAcid20 rep B; time point 2 +0.1 -3.6 N.D. -0.5 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.1 -3.6 N.D. -0.3 +0.0
carbon source Ying_OrganicAcid7 rep B; time point 2 +0.4 -3.7 N.D. -0.5 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.3 -3.3 N.D. -0.6 -0.1
carbon source Ying_AminoAcid20 rep C; time point 2 +0.6 -3.7 N.D. -0.6 -0.0
carbon source Ying_sugar7 rep B; time point 3 +0.0 -2.7 N.D. -0.9 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.2 -3.1 N.D. -0.3 +0.0
carbon source Ying_sugar7 rep A; time point 1 -0.1 -3.0 N.D. -0.5 -0.0
carbon source Ying_sugar7 rep C; time point 1 +0.0 -2.6 N.D. -0.8 -0.0
carbon source D-Maltose (C) -0.0 -2.6 N.D. -0.8 -0.0
carbon source Ying_AminoAcid20 rep A; time point 1 +0.6 -3.3 N.D. -0.6 -0.0
carbon source Ying_OrganicAcid7 rep A; time point 2 +0.4 -3.6 N.D. -0.2 +0.1
carbon source Ying_OrganicAcid7 rep C; time point 2 +0.4 -3.1 N.D. -0.5 -0.0
carbon source 2-Deoxy-D-Ribose (C) -0.4 -2.5 N.D. -0.4 +0.2
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus +0.3 -2.7 N.D. -0.4 -0.2
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus +0.2 -3.0 N.D. -0.3 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.4 -3.0 N.D. -0.3 +0.0
carbon source casaminos (C) +0.3 -3.0 N.D. -0.2 +0.0
r2a no stress control R2A no stress control +0.7 -2.9 N.D. -0.3 -0.0
carbon source Glucuronamide (C) -0.8 -1.9 N.D. +0.4 +0.4
carbon source D-Glucuronic Acid (C) +0.4 -2.7 N.D. +0.7 -0.3
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