Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS15990 and ABIE51_RS15995 are separated by 85 nucleotidesABIE51_RS15995 and ABIE51_RS16000 are separated by 7 nucleotidesABIE51_RS16000 and ABIE51_RS16005 are separated by 136 nucleotidesABIE51_RS16005 and ABIE51_RS16010 are separated by 97 nucleotides ABIE51_RS15990: ABIE51_RS15990 - PTS sugar transporter subunit IIA, at 3,462,707 to 3,463,099 _RS15990 ABIE51_RS15995: ABIE51_RS15995 - HPr family phosphocarrier protein, at 3,463,185 to 3,463,454 _RS15995 ABIE51_RS16000: ABIE51_RS16000 - phosphoenolpyruvate--protein phosphotransferase, at 3,463,462 to 3,465,189 _RS16000 ABIE51_RS16005: ABIE51_RS16005 - magnesium transporter, at 3,465,326 to 3,466,687 _RS16005 ABIE51_RS16010: ABIE51_RS16010 - prolyl oligopeptidase family serine peptidase, at 3,466,785 to 3,467,615 _RS16010
Group Condition ABIE51_RS15990 ABIE51_RS15995 ABIE51_RS16000 ABIE51_RS16005 ABIE51_RS16010
carbon source Ying_sugar7 rep A; time point 3 -4.5 N.D. +0.2 N.D. -0.8
carbon source Ying_all64 rep A; time point 3 -4.6 N.D. +0.3 N.D. -0.3
carbon source Ying_sugar7 rep C; time point 3 -3.9 N.D. +0.2 N.D. -0.2
carbon source Ying_sugar7 rep B; time point 2 -4.3 N.D. +0.5 N.D. -0.1
carbon source Ying_sugar7 rep B; time point 3 -3.6 N.D. +0.4 N.D. +0.0
carbon source D-Cellobiose (C) -2.4 N.D. +0.2 N.D. -0.8
carbon source D-Galactose (C) -2.4 N.D. -0.2 N.D. -0.1
carbon source Ying_sugar7 rep C; time point 2 -3.5 N.D. +0.4 N.D. +0.3
carbon source D-Maltose (C) -1.9 N.D. -0.4 N.D. -0.2
carbon source Ying_all64 rep B; time point 3 -1.6 N.D. +0.5 N.D. -1.2
carbon source Ying_all64 rep A; time point 2 -2.6 N.D. +0.4 N.D. +0.1
carbon source Ying_sugar7 rep A; time point 2 -2.6 N.D. +0.5 N.D. +0.1
r2a no stress control R2A no stress control -2.5 N.D. -0.0 N.D. +0.6
carbon source Ying_all64 rep C; time point 3 -2.1 N.D. +0.4 N.D. -0.2
carbon source Ying_AminoAcid20 rep C; time point 2 -3.4 N.D. +1.0 N.D. +0.6
carbon source Ying_AminoAcid20 rep B; time point 3 -2.6 N.D. +1.1 N.D. -0.2
carbon source Ying_AminoAcid20 rep C; time point 3 -2.8 N.D. +1.2 N.D. -0.0
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -2.2 N.D. +0.3 N.D. +0.3
carbon source Ying_AminoAcid20 rep A; time point 3 -2.5 N.D. +1.2 N.D. -0.2
carbon source Ying_sugar7 rep C; time point 1 -1.9 N.D. +0.6 N.D. +0.0
carbon source Ying_AminoAcid20 rep A; time point 2 -1.9 N.D. +1.1 N.D. -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -1.6 N.D. +0.2 N.D. +0.5
carbon source Ying_all64 rep B; time point 2 -1.6 N.D. +0.4 N.D. +0.3
carbon source Ying_AminoAcid20 rep B; time point 2 -1.8 N.D. +1.0 N.D. +0.1
carbon source Ying_AminoAcid20 rep C; time point 1 -1.6 N.D. +1.0 N.D. -0.0
carbon source Ying_OrganicAcid7 rep C; time point 2 -2.3 N.D. +1.3 N.D. +0.4
carbon source Ying_OrganicAcid7 rep A; time point 2 -1.9 N.D. +1.1 N.D. +0.4
carbon source Ying_AminoAcid20 rep B; time point 1 -1.5 N.D. +1.0 N.D. +0.0
carbon source Ying_OrganicAcid7 rep B; time point 2 -1.8 N.D. +1.0 N.D. +0.4
carbon source Ying_AminoAcid20 rep A; time point 1 -1.8 N.D. +0.9 N.D. +0.6
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