Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS15595 and ABIE51_RS15600 are separated by 56 nucleotidesABIE51_RS15600 and ABIE51_RS15605 are separated by 101 nucleotidesABIE51_RS15605 and ABIE51_RS15610 are separated by 10 nucleotidesABIE51_RS15610 and ABIE51_RS15615 overlap by 4 nucleotides ABIE51_RS15595: ABIE51_RS15595 - oligopeptide:H+ symporter, at 3,383,853 to 3,385,631 _RS15595 ABIE51_RS15600: ABIE51_RS15600 - S9 family peptidase, at 3,385,688 to 3,387,670 _RS15600 ABIE51_RS15605: ABIE51_RS15605 - dTDP-4-dehydrorhamnose reductase, at 3,387,772 to 3,388,656 _RS15605 ABIE51_RS15610: ABIE51_RS15610 - dTDP-4-dehydrorhamnose 3,5-epimerase, at 3,388,667 to 3,389,224 _RS15610 ABIE51_RS15615: ABIE51_RS15615 - glucose-1-phosphate thymidylyltransferase RfbA, at 3,389,221 to 3,390,105 _RS15615
Group Condition ABIE51_RS15595 ABIE51_RS15600 ABIE51_RS15605 ABIE51_RS15610 ABIE51_RS15615
carbon source Ying_sugar7 rep C; time point 2 -0.0 +0.0 N.D. N.D. -5.7
carbon source Ying_OrganicAcid7 rep B; time point 2 +0.1 +0.1 N.D. N.D. -5.7
carbon source Glucuronamide (C) -0.0 -0.1 N.D. N.D. -4.8
carbon source Ying_all64 rep C; time point 3 +0.0 +0.0 N.D. N.D. -4.8
carbon source Ying_sugar7 rep B; time point 2 +0.0 +0.0 N.D. N.D. -4.7
carbon source D-Galactose (C) -0.1 +0.0 N.D. N.D. -4.5
carbon source Ying_all64 rep B; time point 3 +0.0 -0.2 N.D. N.D. -4.3
carbon source Ying_all64 rep C; time point 2 +0.1 -0.0 N.D. N.D. -4.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.0 +0.0 N.D. N.D. -4.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.1 +0.0 N.D. N.D. -4.5
carbon source Ying_all64 rep A; time point 2 +0.0 -0.0 N.D. N.D. -4.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.0 -0.1 N.D. N.D. -4.1
carbon source Ying_AminoAcid20 rep A; time point 1 +0.0 +0.1 N.D. N.D. -4.5
carbon source Ying_sugar7 rep A; time point 2 -0.1 +0.2 N.D. N.D. -4.3
carbon source Ying_sugar7 rep C; time point 1 -0.0 +0.0 N.D. N.D. -4.2
carbon source Ying_all64 rep B; time point 2 +0.1 -0.0 N.D. N.D. -4.2
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus +0.1 -0.2 N.D. N.D. -3.9
carbon source Ying_all64 rep C; time point 1 +0.1 +0.1 N.D. N.D. -4.1
carbon source Ying_OrganicAcid7 rep A; time point 2 +0.1 +0.3 N.D. N.D. -4.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.2 -0.1 N.D. N.D. -4.0
carbon source Ying_sugar7 rep B; time point 3 -0.1 +0.0 N.D. N.D. -3.8
carbon source Ying_AminoAcid20 rep C; time point 1 +0.2 +0.1 N.D. N.D. -4.2
carbon source Ying_sugar7 rep A; time point 1 +0.1 +0.0 N.D. N.D. -3.9
carbon source Ying_OrganicAcid7 rep C; time point 1 +0.1 +0.1 N.D. N.D. -4.0
carbon source Ying_all64 rep B; time point 1 +0.0 +0.2 N.D. N.D. -4.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.1 -0.1 N.D. N.D. -3.7
carbon source Ying_all64 rep A; time point 1 +0.0 +0.0 N.D. N.D. -3.8
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.0 +0.2 N.D. N.D. -4.0
carbon source Ying_sugar7 rep C; time point 3 -0.1 +0.2 N.D. N.D. -3.7
carbon source L-Asparagine (C) +0.0 +0.3 N.D. N.D. -3.8
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