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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS15055 and ABIE51_RS15060 are separated by 131 nucleotides
ABIE51_RS15060 and ABIE51_RS15065 are separated by 20 nucleotides
ABIE51_RS15065 and ABIE51_RS15070 are separated by 38 nucleotides
ABIE51_RS15070 and ABIE51_RS15075 are separated by 71 nucleotides
ABIE51_RS15055: ABIE51_RS15055 - aldehyde-activating protein, at 3,270,634 to 3,271,035
_RS15055
ABIE51_RS15060: ABIE51_RS15060 - serine hydrolase, at 3,271,167 to 3,272,783
_RS15060
ABIE51_RS15065: ABIE51_RS15065 - TonB-dependent receptor, at 3,272,804 to 3,276,253
_RS15065
ABIE51_RS15070: ABIE51_RS15070 - hypothetical protein, at 3,276,292 to 3,276,504
_RS15070
ABIE51_RS15075: ABIE51_RS15075 - peptide MFS transporter, at 3,276,576 to 3,277,898
_RS15075
Group
Condition
ABIE51
_RS15055
ABIE51
_RS15060
ABIE51
_RS15065
ABIE51
_RS15070
ABIE51
_RS15075
carbon source
D-Glucuronic Acid (C)
-0.1
+0.1
-0.1
-0.5
-0.2
carbon source
L-Malic (C)
-0.0
-0.1
-0.1
-0.4
-0.2
carbon source
D-Galactose (C)
+0.0
-0.2
-0.0
-0.4
-0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.3
-0.1
-0.0
-0.3
+0.1
carbon source
2-Deoxy-D-Ribose (C)
+0.0
+0.2
-0.1
-0.7
-0.1
carbon source
L-Glutamine (C)
-0.2
+0.2
+0.1
-0.4
-0.3
carbon source
Ying_sugar7 rep C; time point 3
-0.2
-0.2
+0.0
+0.0
-0.2
carbon source
L-tyrosine (C)
+0.0
-0.2
-0.0
-0.3
+0.1
carbon source
Glucuronamide (C)
+0.1
-0.3
-0.1
-0.1
-0.1
carbon source
Ying_Others16 rep B; time point 1
-0.1
+0.1
+0.1
-0.5
-0.1
carbon source
Ying_sugar7 rep B; time point 2
+0.1
-0.0
-0.0
-0.4
-0.1
carbon source
D-Cellobiose (C)
-0.0
+0.3
-0.1
-0.4
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-0.3
+0.2
+0.1
-0.3
-0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-0.1
+0.1
+0.1
-0.4
+0.1
carbon source
Fumarate (C)
+0.1
+0.2
-0.1
-0.3
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-0.1
+0.0
+0.0
-0.3
+0.2
carbon source
Ying_all64 rep A; time point 1
-0.3
+0.3
-0.0
-0.1
-0.1
carbon source
Fumarate (C)
-0.2
+0.1
-0.0
+0.2
-0.2
carbon source
Ying_AminoAcid20 rep A; time point 1
+0.1
+0.3
-0.0
-0.3
-0.2
carbon source
Ying_sugar7 rep A; time point 2
+0.1
+0.2
+0.1
-0.4
-0.0
carbon source
Ying_Others16 rep A; time point 1
+0.0
+0.2
+0.1
-0.3
-0.0
carbon source
pyruvate (C)
+0.1
-0.1
-0.0
-0.2
+0.2
stress
R2A with 3-octanone 2.65516666666667 mM
+0.3
-0.2
-0.0
+0.1
-0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-0.2
+0.3
+0.1
-0.2
+0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.1
+0.3
+0.1
-0.2
+0.1
carbon source
Ying_OrganicAcid7 rep C; time point 2
-0.0
+0.3
+0.1
-0.1
-0.1
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
+0.1
+0.3
+0.1
-0.3
+0.1
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
-0.1
+0.3
+0.1
-0.3
+0.2
carbon source
Ying_AminoAcid20 rep B; time point 2
+0.1
+0.4
-0.0
-0.1
-0.1
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.0
+0.1
-0.0
+0.5
-0.0
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