Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS15040 and ABIE51_RS15045 are separated by 301 nucleotidesABIE51_RS15045 and ABIE51_RS15050 are separated by 96 nucleotidesABIE51_RS15050 and ABIE51_RS15055 are separated by 527 nucleotidesABIE51_RS15055 and ABIE51_RS15060 are separated by 131 nucleotides ABIE51_RS15040: ABIE51_RS15040 - phytase, at 3,265,708 to 3,266,730 _RS15040 ABIE51_RS15045: ABIE51_RS15045 - TonB-dependent receptor, at 3,267,032 to 3,269,377 _RS15045 ABIE51_RS15050: ABIE51_RS15050 - uracil phosphoribosyltransferase, at 3,269,474 to 3,270,106 _RS15050 ABIE51_RS15055: ABIE51_RS15055 - aldehyde-activating protein, at 3,270,634 to 3,271,035 _RS15055 ABIE51_RS15060: ABIE51_RS15060 - serine hydrolase, at 3,271,167 to 3,272,783 _RS15060
Group Condition ABIE51_RS15040 ABIE51_RS15045 ABIE51_RS15050 ABIE51_RS15055 ABIE51_RS15060
carbon source acetate (C) -0.1 +0.1 -0.5 -0.0 -0.3
carbon source D-Glucose-6-Phosphate (C) -0.2 +0.0 -0.3 +0.0 -0.2
carbon source L-Asparagine (C) -0.7 -0.3 +0.3 -0.0 -0.0
carbon source succinate (C) -0.5 +0.1 -0.0 -0.1 +0.1
stress R2A with 2-pentyl-furan 32.0526 mM -0.2 -0.1 -0.1 +0.2 -0.2
carbon source Ying_all64 rep A; time point 1 -0.1 -0.0 -0.2 -0.3 +0.3
carbon source 2-Deoxy-D-Ribose (C) +0.2 -0.2 -0.4 +0.0 +0.2
carbon source L-Tryptophan (C) -0.3 +0.3 -0.1 +0.0 -0.2
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus +0.0 +0.1 -0.5 -0.1 +0.3
carbon source Fumarate (C) -0.4 +0.1 +0.2 -0.2 +0.1
carbon source D-Cellobiose (C) +0.2 +0.2 -0.8 -0.0 +0.3
carbon source Glucuronamide (C) -0.3 +0.1 +0.3 +0.1 -0.3
stress R2A with 2-pentyl-furan 21.3684 mM -0.0 +0.1 +0.2 -0.3 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media +0.2 -0.0 -0.4 -0.2 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.2 +0.1 -0.1 -0.1 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.0 +0.2 -0.0 -0.3 +0.2
carbon source Fumarate (C) -0.2 -0.1 +0.2 +0.1 +0.2
carbon source Ying_AminoAcid20 rep C; time point 3 +0.2 -0.1 +0.4 -0.1 -0.1
dmso control DMSO control -0.0 +0.1 -0.2 -0.0 +0.4
carbon source Ying_sugar7 rep B; time point 3 +0.2 -0.1 +0.4 -0.1 -0.0
stress R2A with 3-octanone 2.65516666666667 mM +0.1 -0.0 +0.1 +0.3 -0.2
carbon source L-Glutamine (C) -0.2 +0.1 +0.3 -0.2 +0.2
stress R2A with 2-pentyl-furan 21.3684 mM +0.1 +0.1 +0.3 -0.3 +0.1
stress R2A with 1-octen-3-ol 0.904549 mM +0.3 +0.2 -0.2 -0.0 +0.2
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.3 +0.2 -0.4 +0.1 +0.3
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.3 +0.2 -0.1 -0.1 +0.2
stress R2A with 1-octen-3-ol 1.08545883333333 mM -0.0 +0.1 +0.5 -0.1 +0.3
carbon source Ying_all64 rep C; time point 2 +0.3 +0.1 -0.0 +0.1 +0.4
r2a no stress control R2A no stress control +0.1 +0.2 +0.3 -0.0 +0.1
carbon source Ying_AminoAcid20 rep B; time point 2 +0.1 +0.1 +0.3 +0.1 +0.4
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