Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS14900 and ABIE51_RS14905 are separated by 182 nucleotidesABIE51_RS14905 and ABIE51_RS14910 are separated by 78 nucleotidesABIE51_RS14910 and ABIE51_RS14915 are separated by 4 nucleotidesABIE51_RS14915 and ABIE51_RS14920 are separated by 123 nucleotides ABIE51_RS14900: ABIE51_RS14900 - TonB-dependent receptor, at 3,233,649 to 3,236,096 _RS14900 ABIE51_RS14905: ABIE51_RS14905 - DMT family transporter, at 3,236,279 to 3,237,208 _RS14905 ABIE51_RS14910: ABIE51_RS14910 - ExeA family protein, at 3,237,287 to 3,238,603 _RS14910 ABIE51_RS14915: ABIE51_RS14915 - general secretion pathway protein GspB, at 3,238,608 to 3,239,447 _RS14915 ABIE51_RS14920: ABIE51_RS14920 - DoxX family protein, at 3,239,571 to 3,239,966 _RS14920
Group Condition ABIE51_RS14900 ABIE51_RS14905 ABIE51_RS14910 ABIE51_RS14915 ABIE51_RS14920
stress R2A with 3-octanone 5.31033333333333 mM -0.3 -0.2 -0.3 -0.6 N.D.
carbon source succinate (C) -0.3 +0.0 +0.0 -0.9 N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.1 -0.8 -0.2 -0.2 N.D.
carbon source Ying_sugar7 rep B; time point 3 -0.3 -0.4 -0.1 -0.2 N.D.
r2a no stress control R2A no stress control -0.1 -0.4 -0.1 -0.3 N.D.
stress R2A with 2-pentyl-furan 10.6842 mM -0.1 -0.5 -0.3 -0.1 N.D.
carbon source D-Maltose (C) -0.1 -0.7 -0.1 -0.0 N.D.
carbon source propionate (C) +0.0 -0.5 -0.4 +0.0 N.D.
carbon source L-Malic (C) +0.1 -0.3 +0.1 -0.8 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.1 -0.3 -0.0 -0.4 N.D.
carbon source D-Galactose (C) +0.0 -0.6 -0.1 -0.1 N.D.
dmso control DMSO control +0.0 -0.4 -0.1 -0.2 N.D.
carbon source L-tyrosine (C) +0.0 -0.2 -0.5 +0.0 N.D.
stress R2A with 2-pentyl-furan 32.0526 mM -0.0 -0.5 -0.2 +0.0 N.D.
carbon source Fumarate (C) -0.1 -0.5 +0.1 +0.1 N.D.
carbon source Ying_AminoAcid20 rep B; time point 3 +0.2 -0.5 -0.0 -0.1 N.D.
carbon source D-Glucose-6-Phosphate (C) +0.1 -0.6 -0.1 +0.1 N.D.
carbon source Ying_all64 rep A; time point 3 +0.1 -0.5 +0.1 +0.1 N.D.
carbon source D-Galactose (C) +0.0 -0.4 +0.2 -0.2 N.D.
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.0 +0.3 -0.1 -0.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.1 +0.3 +0.0 -0.4 N.D.
carbon source Ying_AminoAcid20 rep A; time point 2 +0.2 +0.2 -0.4 +0.0 N.D.
carbon source Ying_AminoAcid20 rep C; time point 1 +0.0 +0.5 -0.1 -0.1 N.D.
stress R2A with 3-octanone 5.31033333333333 mM +0.1 +0.5 +0.0 -0.3 N.D.
carbon source L-Asparagine (C) +0.2 +0.4 -0.1 -0.0 N.D.
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.1 +0.4 +0.1 -0.1 N.D.
carbon source Ying_Others16 rep B; time point 1 +0.1 +0.5 -0.1 +0.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.0 +0.4 -0.0 +0.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.0 +0.6 +0.1 +0.2 N.D.
carbon source Glucuronamide (C) +0.2 +0.7 -0.0 +0.2 N.D.
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