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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS14815 and ABIE51_RS14820 are separated by 2 nucleotides
ABIE51_RS14820 and ABIE51_RS14825 are separated by 362 nucleotides
ABIE51_RS14825 and ABIE51_RS14830 are separated by 13 nucleotides
ABIE51_RS14830 and ABIE51_RS14835 are separated by 12 nucleotides
ABIE51_RS14815: ABIE51_RS14815 - VOC family protein, at 3,219,832 to 3,220,269
_RS14815
ABIE51_RS14820: ABIE51_RS14820 - DUF72 domain-containing protein, at 3,220,272 to 3,221,087
_RS14820
ABIE51_RS14825: ABIE51_RS14825 - aldo/keto reductase, at 3,221,450 to 3,222,415
_RS14825
ABIE51_RS14830: ABIE51_RS14830 - MFS transporter, at 3,222,429 to 3,223,748
_RS14830
ABIE51_RS14835: ABIE51_RS14835 - cyclase family protein, at 3,223,761 to 3,224,666
_RS14835
Group
Condition
ABIE51
_RS14815
ABIE51
_RS14820
ABIE51
_RS14825
ABIE51
_RS14830
ABIE51
_RS14835
carbon source
Glucuronamide (C)
-0.6
-0.4
-0.3
-0.4
+0.2
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
-0.5
-0.5
-0.1
+0.3
-0.5
carbon source
pyruvate (C)
-0.7
-0.5
+0.0
+0.0
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-0.2
-0.2
-0.7
+0.1
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.8
-0.1
-0.1
+0.3
-0.2
carbon source
Ying_OrganicAcid7 rep B; time point 1
-0.7
-0.1
-0.0
+0.2
-0.2
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
-0.2
-0.8
+0.1
+0.1
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.4
-0.3
-0.2
+0.3
-0.1
carbon source
Fumarate (C)
-0.1
-0.4
+0.1
-0.0
-0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-0.6
+0.0
-0.4
+0.3
-0.1
stress
R2A with 3-octanone 5.31033333333333 mM
-0.3
+0.2
-0.3
-0.2
+0.0
stress
R2A with 3-octanone 5.31033333333333 mM
+0.4
-0.2
-0.4
-0.1
-0.1
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
-0.3
-0.1
-0.2
+0.4
-0.2
carbon source
D-Galactose (C)
-0.3
-0.2
+0.7
-0.2
-0.0
carbon source
Ying_AminoAcid20 rep A; time point 3
+0.2
+0.2
-0.5
-0.2
+0.2
carbon source
Ying_Others16 rep B; time point 1
+0.6
+0.1
-0.5
+0.1
-0.2
carbon source
Ying_all64 rep B; time point 3
+0.0
+0.6
-0.3
-0.2
-0.1
carbon source
Ying_all64 rep A; time point 3
+0.4
+0.2
-0.3
-0.3
+0.2
carbon source
Ying_sugar7 rep C; time point 3
+0.5
+0.1
-0.3
-0.2
+0.1
carbon source
Ying_sugar7 rep B; time point 3
+0.5
+0.1
-0.2
-0.3
-0.0
carbon source
D-Glucose-6-Phosphate (C)
-0.2
+0.3
+0.4
+0.0
-0.4
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
+0.1
+0.5
-0.4
+0.0
+0.1
carbon source
L-Asparagine (C)
-0.1
+0.7
-0.1
-0.2
-0.0
carbon source
succinate (C)
-0.4
-0.1
+0.9
+0.3
-0.3
carbon source
Ying_AminoAcid20 rep C; time point 3
+0.5
+0.1
-0.0
-0.1
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
+0.3
+0.5
-0.1
-0.2
+0.1
carbon source
D-Cellobiose (C)
-0.1
+0.9
+0.2
-0.1
-0.1
carbon source
Fumarate (C)
+0.6
+0.2
+0.2
-0.2
-0.1
carbon source
D-Maltose (C)
-0.4
+0.7
+0.5
+0.3
-0.1
carbon source
Ying_Others16 rep A; time point 1
-0.0
+0.6
+0.2
+0.0
+0.3
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