Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS14710 and ABIE51_RS14715 are separated by 31 nucleotidesABIE51_RS14715 and ABIE51_RS14720 are separated by 908 nucleotidesABIE51_RS14720 and ABIE51_RS14725 are separated by 2 nucleotidesABIE51_RS14725 and ABIE51_RS14730 are separated by 280 nucleotides ABIE51_RS14710: ABIE51_RS14710 - efflux RND transporter periplasmic adaptor subunit, at 3,197,420 to 3,198,568 _RS14710 ABIE51_RS14715: ABIE51_RS14715 - efflux RND transporter permease subunit, at 3,198,600 to 3,201,680 _RS14715 ABIE51_RS14720: ABIE51_RS14720 - LytTR family DNA-binding domain-containing protein, at 3,202,589 to 3,203,485 _RS14720 ABIE51_RS14725: ABIE51_RS14725 - histidine kinase, at 3,203,488 to 3,204,573 _RS14725 ABIE51_RS14730: ABIE51_RS14730 - YihY/virulence factor BrkB family protein, at 3,204,854 to 3,205,771 _RS14730
Group Condition ABIE51_RS14710 ABIE51_RS14715 ABIE51_RS14720 ABIE51_RS14725 ABIE51_RS14730
carbon source succinate (C) -0.6 -0.6 +0.1 -0.1 +0.2
carbon source L-Asparagine (C) -0.0 -0.0 -0.6 -0.2 -0.2
carbon source Ying_all64 rep B; time point 3 -0.2 +0.1 -0.1 -0.4 -0.3
carbon source Glucuronamide (C) -0.2 -0.4 -0.2 -0.1 +0.2
carbon source L-Malic (C) -0.2 +0.1 +0.2 -0.4 +0.1
carbon source L-Glutamine (C) -0.4 +0.3 +0.1 -0.2 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.3 +0.2 -0.2 +0.0 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.0 -0.1 -0.4 +0.3 +0.2
stress R2A with 2-pentyl-furan 21.3684 mM +0.3 +0.1 -0.5 -0.2 +0.2
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.3 +0.2 -0.4 +0.2 +0.3
carbon source Ying_all64 rep A; time point 2 -0.4 +0.1 +0.1 +0.2 +0.1
carbon source L-Tryptophan (C) +0.7 -0.5 +0.0 +0.1 -0.2
carbon source Ying_AminoAcid20 rep A; time point 1 -0.2 +0.3 -0.2 +0.1 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.2 -0.3 -0.2 +0.2 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media +0.2 +0.5 +0.0 -0.1 -0.3
stress R2A with 3-octanone 2.65516666666667 mM -0.3 +0.3 -0.2 +0.2 +0.3
carbon source pyruvate (C) +0.4 -0.4 +0.4 -0.1 +0.2
carbon source Ying_AminoAcid20 rep C; time point 3 +0.3 -0.0 +0.5 -0.2 -0.0
carbon source Ying_all64 rep C; time point 2 -0.2 +0.3 +0.1 +0.2 +0.1
stress R2A with 3-octanone 5.31033333333333 mM +0.2 +0.5 -0.2 +0.1 +0.1
carbon source D-Maltose (C) +0.2 -0.2 +0.1 +0.2 +0.3
carbon source Ying_Others16 rep C; time point 1 -0.2 +0.0 +0.2 +0.2 +0.4
carbon source Ying_Others16 rep A; time point 1 +0.1 +0.3 -0.2 +0.2 +0.3
stress R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM +0.2 +0.3 +0.4 -0.1 -0.0
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.1 +0.1 +0.0 +0.3 +0.4
stress R2A with 2-pentyl-furan 10.6842 mM +0.2 +0.4 +0.3 +0.1 +0.0
stress R2A with 3-octanone 2.65516666666667 mM +0.2 +0.2 +0.0 +0.2 +0.3
stress R2A with 2-pentyl-furan 10.6842 mM +0.2 +0.3 +0.1 +0.2 +0.2
carbon source pyruvate (C) +0.2 +0.3 +0.4 -0.1 +0.2
carbon source D-Galactose (C) +0.4 +0.3 +0.3 +0.1 +0.2
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