Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS14675 and ABIE51_RS14680 are separated by 2 nucleotidesABIE51_RS14680 and ABIE51_RS14685 overlap by 4 nucleotidesABIE51_RS14685 and ABIE51_RS14690 are separated by 260 nucleotidesABIE51_RS14690 and ABIE51_RS14695 are separated by 112 nucleotides ABIE51_RS14675: ABIE51_RS14675 - response regulator, at 3,187,714 to 3,189,246 _RS14675 ABIE51_RS14680: ABIE51_RS14680 - response regulator, at 3,189,249 to 3,189,704 _RS14680 ABIE51_RS14685: ABIE51_RS14685 - ATP-binding protein, at 3,189,701 to 3,191,512 _RS14685 ABIE51_RS14690: ABIE51_RS14690 - hypothetical protein, at 3,191,773 to 3,191,964 _RS14690 ABIE51_RS14695: ABIE51_RS14695 - PAS domain-containing sensor histidine kinase, at 3,192,077 to 3,193,264 _RS14695
Group Condition ABIE51_RS14675 ABIE51_RS14680 ABIE51_RS14685 ABIE51_RS14690 ABIE51_RS14695
carbon source Fumarate (C) -0.6 -0.4 +0.1 -1.1 +0.1
carbon source Ying_all64 rep A; time point 3 +0.2 -0.2 -0.2 -1.3 -0.3
carbon source Ying_Others16 rep B; time point 1 -0.6 -0.3 -0.0 -0.7 -0.1
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus -0.2 -0.3 +0.0 -0.4 -0.3
carbon source L-Glutamine (C) -0.4 -0.4 -0.2 +0.2 -0.2
stress R2A with 2-pentyl-furan 21.3684 mM +0.4 -0.1 +0.2 -1.3 +0.1
stress R2A with 2-pentyl-furan 32.0526 mM +0.4 +0.1 -0.1 -1.1 -0.1
stress R2A with 2-pentyl-furan 21.3684 mM +0.2 +0.0 +0.1 -1.0 -0.0
carbon source L-tyrosine (C) +0.3 -0.2 -0.2 -0.3 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.5 -0.2 +0.1 +0.4 -0.4
carbon source acetate (C) -0.2 -0.4 -0.2 +0.5 -0.3
stress R2A with 1-octen-3-ol 0.904549 mM +0.3 -0.0 +0.1 -0.9 -0.0
stress R2A with 1-octen-3-ol 0.904549 mM +0.6 -0.1 +0.0 -1.1 +0.1
carbon source L-Asparagine (C) -0.4 -0.2 -0.0 +0.8 -0.4
r2a no stress control R2A no stress control +0.4 -0.0 -0.1 -0.6 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.7 +0.3 -0.1 +0.5 -0.1
carbon source D-Maltose (C) +0.1 -0.1 +0.0 +0.5 -0.5
carbon source L-Malic (C) -0.2 +0.0 +0.3 +0.4 -0.5
carbon source D-Cellobiose (C) -0.3 -0.0 +0.2 +0.5 -0.2
carbon source D-Glucuronic Acid (C) -0.5 +0.3 -0.2 +0.5 +0.0
stress R2A with 1-octen-3-ol 1.08545883333333 mM +0.2 +0.2 -0.1 -0.4 +0.3
stress R2A with 2-pentyl-furan 32.0526 mM +0.2 +0.2 +0.4 -0.5 +0.1
carbon source pyruvate (C) +0.3 -0.1 -0.3 +0.9 -0.5
stress R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM +0.9 -0.1 -0.1 -0.2 -0.1
carbon source Fumarate (C) -0.5 +0.1 -0.1 +0.8 +0.2
carbon source L-Tryptophan (C) -0.1 +0.1 -0.2 +1.0 -0.4
carbon source 2-Deoxy-D-Ribose (C) +0.1 -0.1 -0.1 +0.7 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.0 -0.2 +0.0 +1.0 +0.2
carbon source succinate (C) +0.6 +0.2 -0.2 +1.0 +0.2
carbon source Glucuronamide (C) +0.9 +0.3 +0.1 +1.2 -0.2
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