Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS14410 and ABIE51_RS14415 are separated by 457 nucleotidesABIE51_RS14415 and ABIE51_RS14420 are separated by 430 nucleotidesABIE51_RS14420 and ABIE51_RS14425 are separated by 430 nucleotidesABIE51_RS14425 and ABIE51_RS14430 are separated by 83 nucleotides ABIE51_RS14410: ABIE51_RS14410 - M1 family metallopeptidase, at 3,127,723 to 3,130,368 _RS14410 ABIE51_RS14415: ABIE51_RS14415 - hypothetical protein, at 3,130,826 to 3,131,257 _RS14415 ABIE51_RS14420: ABIE51_RS14420 - sensor domain-containing diguanylate cyclase, at 3,131,688 to 3,132,536 _RS14420 ABIE51_RS14425: ABIE51_RS14425 - CHASE3 domain-containing protein, at 3,132,967 to 3,133,512 _RS14425 ABIE51_RS14430: ABIE51_RS14430 - 2'-5' RNA ligase family protein, at 3,133,596 to 3,134,294 _RS14430
Group Condition ABIE51_RS14410 ABIE51_RS14415 ABIE51_RS14420 ABIE51_RS14425 ABIE51_RS14430
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.1 N.D. -0.4 -0.0 -0.1
carbon source 2-Deoxy-D-Ribose (C) +0.0 N.D. -0.5 -0.2 +0.0
carbon source D-Maltose (C) -0.1 N.D. +0.2 +0.0 -0.7
carbon source L-tyrosine (C) +0.1 N.D. -0.2 -0.3 +0.1
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.0 N.D. +0.1 +0.1 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.0 N.D. +0.0 +0.2 -0.4
stress R2A with 3-octanone 1.77016666666667 mM +0.1 N.D. +0.1 -0.5 +0.1
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.1 N.D. +0.2 +0.1 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media +0.2 N.D. -0.4 +0.1 -0.0
carbon source D-Galactose (C) +0.0 N.D. -0.3 -0.1 +0.3
carbon source casaminos (C) +0.2 N.D. +0.2 -0.2 -0.2
dmso control DMSO control +0.1 N.D. +0.3 -0.1 -0.3
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.1 N.D. +0.5 -0.0 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.2 N.D. -0.1 +0.2 -0.1
carbon source D-Glucose-6-Phosphate (C) +0.0 N.D. +0.3 -0.2 +0.1
carbon source D-Maltose (C) +0.1 N.D. +0.2 +0.3 -0.3
carbon source L-Malic (C) +0.3 N.D. +0.3 -0.1 -0.1
carbon source Ying_OrganicAcid7 rep B; time point 1 +0.0 N.D. -0.1 +0.1 +0.5
carbon source L-Tryptophan (C) +0.1 N.D. +0.1 -0.2 +0.3
carbon source Fumarate (C) +0.1 N.D. +0.4 +0.1 -0.1
carbon source L-Glutamine (C) +0.1 N.D. +0.4 -0.0 -0.1
carbon source Ying_all64 rep B; time point 3 +0.2 N.D. -0.1 +0.0 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.1 N.D. +0.3 +0.1 +0.2
carbon source Ying_Others16 rep C; time point 1 -0.1 N.D. +0.1 +0.3 +0.1
carbon source Ying_sugar7 rep C; time point 1 +0.0 N.D. +0.3 -0.1 +0.2
carbon source Ying_Nucleobase14 rep C; time point 1 -0.0 N.D. +0.3 +0.1 +0.3
carbon source Ying_AminoAcid20 rep C; time point 3 +0.1 N.D. +0.2 +0.2 +0.2
carbon source Ying_AminoAcid20 rep B; time point 3 +0.1 N.D. +0.3 +0.2 +0.2
carbon source Ying_Others16 rep A; time point 1 -0.0 N.D. +0.6 -0.2 +0.4
carbon source L-Asparagine (C) +0.3 N.D. +0.5 +0.0 +0.1
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